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Published on: January 12, 2024
miR-3140 suppresses tumor cell growth by targeting BRD4 via its coding sequence and downregulates the BRD4-NUT fusion
Erina Tonouchi1,2, Yasuyuki Gen1, Tomoki Muramatsu1
1Department of Molecular Cytogenetics, Medical Research Institute, Tokyo Medical and Dental University, Tokyo, Japan.
Abstract:
Bromodomain Containing 4 (BRD4) mediates transcriptional elongation of the oncogene MYC by binding to acetylated histones. BRD4 has been shown to play a critical role in tumorigenesis in several cancers, and the BRD4-NUT fusion gene is a driver of NUT midline carcinoma (NMC), a rare but highly lethal cancer. microRNAs (miRNAs) are endogenous small non-coding RNAs that suppress target gene expression by binding to complementary mRNA sequences. Here, we show that miR-3140, which was identified as a novel tumor suppressive miRNA by function-based screening of a library containing 1090 miRNA mimics, directly suppressed BRD4 by binding to its coding sequence (CDS). miR-3140 concurrently downregulated BRD3 by bind to its CDS as well as CDK2 and EGFR by binding to their 3' untranslated regions. miR-3140 inhibited tumor cell growth in vitro in various cancer cell lines, including EGFR tyrosine kinase inhibitor-resistant cells. Interestingly, we found that miR-3140 downregulated the BRD4-NUT fusion protein and suppressed in vitro tumor cell growth in a NMC cell line, Ty-82 cells. Furthermore, administration of miR-3140 suppressed in vivo tumor growth in a xenograft mouse model. Our results suggest that miR-3140 is a candidate for the development of miRNA-based cancer therapeutics.
Insights
A novel tumor-suppressive microRNA, miR-3140, directly targets Bromodomain Containing 4 (BRD4) and its fusion protein. This microRNA inhibits cancer cell growth in vitro and in vivo, suggesting its therapeutic potential.
Area of Science:
- Molecular Biology
- Oncology
- Gene Regulation
Background:
- Bromodomain Containing 4 (BRD4) is crucial for oncogene MYC transcription and tumorigenesis.
- NUT midline carcinoma (NMC) is a rare, lethal cancer driven by the BRD4-NUT fusion gene.
- MicroRNAs (miRNAs) are small non-coding RNAs that regulate gene expression.
Purpose of the Study:
- To identify novel tumor-suppressive miRNAs.
- To investigate the role of miR-3140 in cancer, particularly its interaction with BRD4.
- To evaluate miR-3140 as a potential cancer therapeutic.
Main Methods:
- Function-based screening of a miRNA mimic library.
- Direct binding assays to validate miRNA-target interactions (BRD4, BRD3, CDK2, EGFR).
- In vitro cell growth inhibition assays and in vivo xenograft mouse models.
Main Results:
- miR-3140 was identified as a novel tumor-suppressive miRNA.
- miR-3140 directly suppresses BRD4, BRD3, CDK2, and EGFR expression.
- miR-3140 inhibited tumor cell growth in various cancer cell lines, including EGFR inhibitor-resistant cells.
- miR-3140 downregulated the BRD4-NUT fusion protein and suppressed NMC cell growth.
- miR-3140 administration inhibited tumor growth in vivo.
Conclusions:
- miR-3140 directly targets and downregulates BRD4 and the BRD4-NUT fusion protein.
- miR-3140 exhibits potent anti-tumor activity in vitro and in vivo.
- miR-3140 represents a promising candidate for miRNA-based cancer therapeutics.
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