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Updated: Feb 13, 2026

Sequential Salt Extractions for the Analysis of Bulk Chromatin Binding Properties of Chromatin Modifying Complexes
Published on: October 2, 2017
PDGFRβ translocates to the nucleus and regulates chromatin remodeling via TATA element-modifying factor 1
Natalia Papadopoulos1,2, Johan Lennartsson2,3, Carl-Henrik Heldin4,2
1Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Abstract:
Translocation of full-length or fragments of receptors to the nucleus has been reported for several tyrosine kinase receptors. In this paper, we show that a fraction of full-length cell surface platelet-derived growth factor (PDGF) receptor β (PDGFRβ) accumulates in the nucleus at the chromatin and the nuclear matrix after ligand stimulation. Nuclear translocation of PDGFRβ was dependent on PDGF-BB-induced receptor dimerization, clathrin-mediated endocytosis, β-importin, and intact Golgi, occurring in both normal and cancer cells. In the nucleus, PDGFRβ formed ligand-inducible complexes with the tyrosine kinase Fer and its substrate, TATA element-modifying factor 1 (TMF-1). PDGF-BB stimulation decreased TMF-1 binding to the transcriptional regulator Brahma-related gene 1 (Brg-1) and released Brg-1 from the SWI-SNF chromatin remodeling complex. Moreover, knockdown of TMF-1 by small interfering RNA decreased nuclear translocation of PDGFRβ and caused significant up-regulation of the Brg-1/p53-regulated cell cycle inhibitor CDKN1A (encoding p21) without affecting PDGFRβ-inducible immediate-early genes. In conclusion, nuclear interactions of PDGFRβ control proliferation by chromatin remodeling and regulation of p21 levels.
Insights
Platelet-derived growth factor receptor beta (PDGFRβ) translocates to the nucleus, influencing gene expression and cell proliferation. This nuclear PDGFRβ interacts with chromatin remodelers, affecting cell cycle regulation.
Area of Science:
- Cell Biology
- Molecular Oncology
- Signal Transduction
Background:
- Nuclear translocation of tyrosine kinase receptors is a known phenomenon.
- The role of cell surface receptors, like platelet-derived growth factor receptor beta (PDGFRβ), in nuclear functions is increasingly recognized.
Purpose of the Study:
- To investigate the nuclear localization and function of full-length PDGFRβ after ligand stimulation.
- To elucidate the molecular mechanisms and signaling pathways involved in PDGFRβ nuclear translocation and its impact on gene regulation.
Main Methods:
- Utilized cell-based assays to track PDGFRβ localization upon PDGF-BB stimulation.
- Employed techniques such as receptor dimerization assays, clathrin-mediated endocytosis inhibition, and β-importin dependency studies.
- Investigated protein-protein interactions within the nucleus using co-immunoprecipitation and analyzed chromatin remodeling complex activity.
Main Results:
- A fraction of full-length PDGFRβ translocates to the nucleus, associating with chromatin and the nuclear matrix.
- Nuclear translocation is dependent on receptor dimerization, endocytosis, β-importin, and Golgi integrity.
- Nuclear PDGFRβ forms complexes with Fer and TMF-1, leading to reduced TMF-1 binding to Brg-1 and SWI-SNF complex dissociation.
- TMF-1 knockdown impairs PDGFRβ nuclear import and up-regulates the cell cycle inhibitor CDKN1A (p21).
Conclusions:
- Nuclear PDGFRβ plays a critical role in regulating cell proliferation through chromatin remodeling.
- The nuclear PDGFRβ-TMF-1-Brg-1 axis modulates p21 expression, impacting cell cycle control.
- These findings reveal a novel non-canonical function of PDGFRβ in nuclear signaling pathways relevant to both normal and cancer cells.
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