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Extraction and Analysis of Cortisol from Human and Monkey Hair
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Using bundle embeddings to predict daily cortisol levels in human subjects.

Roelof B Toonen1, Klaas J Wardenaar2, Elisabeth H Bos3

  • 1Department of Developmental Psychology, Heymans Institute for Psychological Research, University of Groningen, Faculty of Behavioural and Social Sciences, Grote Kruisstraat 2/1, 9712, TS, Groningen, the Netherlands. r.b.toonen@rug.nl.

BMC Medical Research Methodology
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PubMed
Summary

Analyzing diurnal cortisol patterns with nonlinear lagged vector embeddings, specifically bundle embeddings, improved prediction accuracy. Nighttime cortisol data yielded the best predictions, highlighting this method

Keywords:
Bundle embeddingsCortisolNonlinear dynamic systemsPredictionTime series

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Area of Science:

  • * Dynamical systems analysis
  • * Nonlinear time series analysis
  • * Biological rhythms research

Background:

  • * Biological variables often exhibit diurnal patterns, complicating data analysis.
  • * Linear statistical methods may be inadequate for nonlinear biological dynamics.
  • * Nonlinear lagged vector embeddings offer advanced analytical approaches.

Purpose of the Study:

  • * To evaluate the efficacy of nonlinear lagged vector embeddings for analyzing diurnal biological data.
  • * To compare sequentially weighted global linear maps (SMAP) and bundle embeddings for cortisol time series.
  • * To assess the impact of time-of-day corrections on prediction accuracy.

Main Methods:

  • * Collection of 126 consecutive urinary cortisol measurements from 10 participants (day and night).
  • * Creation of lagged vector embeddings, including 'night,' 'day,' and time-of-day (TOD) corrected bundles.
  • * Application of SMAP for predicting future cortisol values and comparison of global (linear) and local (nonlinear) predictions.

Main Results:

  • * Night bundle embeddings provided the most accurate cortisol predictions, outperforming full and TOD-corrected embeddings.
  • * Day bundle embeddings showed the poorest prediction accuracy.
  • * Bundle embeddings indicated low dimensionality, suggesting processes within a single day, while day bundles had higher dimensions, implying longer processes or noise.

Conclusions:

  • * The bundling approach effectively differentiates night and day cortisol patterns, surpassing conventional time-series methods.
  • * Combining bundling with SMAP is beneficial for analyzing time-series data with periodic components.
  • * This method enhances the understanding of diurnal variations in biological signals.