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Updated: Feb 12, 2026

Two-photon Calcium Imaging in Mice Navigating a Virtual Reality Environment
Published on: February 20, 2014
The effects of navigator distortion and noise level on interleaved EPI DWI reconstruction: a comparison between
Erpeng Dai1, Zhe Zhang1, Xiaodong Ma1
1Center for Biomedical Imaging Research, Department of Biomedical Engineering, School of Medicine, Tsinghua University, Beijing, China.
Purpose:
To study the effects of 2D navigator distortion and noise level on interleaved EPI (iEPI) DWI reconstruction, using either the image- or k-space-based method.
Methods:
The 2D navigator acquisition was adjusted by reducing its echo spacing in the readout direction and undersampling in the phase encoding direction. A POCS-based reconstruction using image-space sampling function (IRIS) algorithm (POCSIRIS) was developed to reduce the impact of navigator distortion. POCSIRIS was then compared with the original IRIS algorithm and a SPIRiT-based k-space algorithm, under different navigator distortion and noise levels.
Results:
Reducing the navigator distortion can improve the reconstruction of iEPI DWI. The proposed POCSIRIS and SPIRiT-based algorithms are more tolerable to different navigator distortion levels, compared to the original IRIS algorithm. SPIRiT may be hindered by low SNR of the navigator.
Conclusion:
Multi-shot iEPI DWI reconstruction can be improved by reducing the 2D navigator distortion. Different reconstruction methods show variable sensitivity to navigator distortion or noise levels. Furthermore, the findings can be valuable in applications such as simultaneous multi-slice accelerated iEPI DWI and multi-slab diffusion imaging.
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