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Updated: Feb 12, 2026

Oral Biofilm Sampling for Microbiome Analysis in Healthy Children
Published on: December 31, 2017
Insights into the human oral microbiome.
Digvijay Verma1, Pankaj Kumar Garg2, Ashok Kumar Dubey3
1Department of Environmental Microbiology, Babasaheb Bhimrao Ambedkar University, Lucknow, India. digvijay.udsc@gmail.com.
The human oral microbiome, containing diverse bacteria, significantly impacts health and disease. Understanding its fluctuations aids in developing microbiome-based biomarkers for early disease diagnosis and therapeutic applications.
Area of Science:
- Microbiology
- Human Microbiome Studies
- Bioinformatics
Background:
- The human oral cavity hosts a complex microbiota, second only to the gastrointestinal tract.
- The expanded Human Oral Microbiome Database (eHOMD) details ~772 prokaryotic species, with 70% cultivable and 30% uncultivable.
- Oral bacteria, primarily from six phyla (Firmicutes, Actinobacteria, Proteobacteria, Fusobacteria, Bacteroidetes, Spirochaetes), influence host metabolism and immunity.
Purpose of the Study:
- To review the human oral microbiome's composition, function, and health implications.
- To highlight the role of altered oral microflora in various diseases.
- To emphasize the potential of metagenomics and sequencing for biomarker development.
Main Methods:
- Literature review of oral microbiome research.
- Analysis of data from the Human Oral Microbiome Database (eHOMD).
- Discussion of advancements in metagenomics and next-generation sequencing.
Main Results:
- Oral bacteria composition is dominated by six major phyla, comprising 96% of the total.
- Altered oral microflora is linked to diseases like diabetes, cancer, and autoimmune disorders.
- Metagenomic and sequencing techniques offer extensive data for identifying microbial patterns.
Conclusions:
- Understanding oral microbial diversity is crucial for recognizing health and disease states.
- Oral microbiome research holds potential for developing diagnostic biomarkers for early disease detection.
- The oral microbiome presents significant diagnostic and therapeutic opportunities, attracting commercial interest.
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