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Author Spotlight: A Computational Pipeline for Analyzing Chimeric Noncoding RNA-Target RNA Interactions in High-Throughput Sequencing Data
Published on: December 1, 2023
Targeting Long Noncoding RNA HMMR-AS1 Suppresses and Radiosensitizes Glioblastoma
Junyang Li1, Xiangjun Ji1, Handong Wang1
1Department of Neurosurgery, Jinling Hospital, Medical School of Nanjing University, Nanjing, 210002, China.
Abstract:
Emergent evidences revealed that long noncoding RNAs (lncRNAs) participate in neoplastic progression. HMMR is an oncogene that is highly expressed in glioblastoma (GBM) and supports GBM growth. Whether lncRNAs regulate HMMR in GBM remains unknown. Herein, we identify that an HMMR antisense lncRNA, HMMR-AS1, is hyperexpressed in GBM cell lines and stabilizes HMMR mRNA. Knockdown of HMMR-AS1 reduces HMMR expression; inhibits cell migration, invasion, and mesenchymal phenotypes; and suppresses GBM cell growth both in vitro and in vivo. Moreover, knockdown of HMMR-AS1 radiosensitizes GBM by reducing DNA repair proteins ATM, RAD51, and BMI1. Our data demonstrate a mechanism of sense-antisense interference between HMMR and HMMR-AS1 in GBM and suggest that targeting HMMR-AS1 is a potential strategy for GBM treatment.
Insights
Long noncoding RNA HMMR-AS1 promotes glioblastoma (GBM) growth by stabilizing the oncogene HMMR. Targeting HMMR-AS1 inhibits GBM progression and enhances radiosensitivity by reducing DNA repair proteins.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Long noncoding RNAs (lncRNAs) are implicated in cancer development.
- The HMMR oncogene drives glioblastoma (GBM) progression.
- The regulatory role of lncRNAs on HMMR in GBM is currently unknown.
Purpose of the Study:
- To investigate the role of lncRNAs in regulating HMMR expression in glioblastoma.
- To identify specific lncRNAs that interact with HMMR in GBM.
- To explore the therapeutic potential of targeting these lncRNAs in GBM treatment.
Main Methods:
- Identification and characterization of HMMR-AS1 in GBM cell lines.
- Assessment of HMMR-AS1's effect on HMMR mRNA stability.
- In vitro and in vivo experiments evaluating the impact of HMMR-AS1 knockdown on GBM cell behavior and tumor growth.
- Analysis of DNA repair protein expression following HMMR-AS1 knockdown.
Main Results:
- HMMR antisense lncRNA (HMMR-AS1) is overexpressed in GBM and stabilizes HMMR mRNA.
- Knockdown of HMMR-AS1 decreases HMMR expression, inhibiting GBM cell migration, invasion, and mesenchymal phenotypes.
- HMMR-AS1 knockdown suppresses GBM cell growth in vitro and in vivo.
- Reducing HMMR-AS1 sensitizes GBM to radiation by downregulating DNA repair proteins ATM, RAD51, and BMI1.
Conclusions:
- HMMR-AS1 acts as a crucial regulator of HMMR in GBM through sense-antisense interference.
- Targeting HMMR-AS1 represents a promising therapeutic strategy for glioblastoma, potentially overcoming radioresistance.
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