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Published on: March 29, 2024
Molecular Characterization of OXA-198 Carbapenemase-Producing Pseudomonas aeruginosa Clinical Isolates
Rémy A Bonnin1,2,3,4, Pierre Bogaerts5,6, Delphine Girlich1,2,3,4
1EA7361, Université Paris Sud, Université Paris-Saclay, LabEx LERMIT, Le Kremlin-Bicêtre, France.
Abstract:
Carbapenemase-producing Pseudomonadaceae have increasingly been reported worldwide, with an ever-increasing heterogeneity of carbapenem resistance mechanisms, depending on the bacterial species and the geographical location. OXA-198 is a plasmid-encoded class D β-lactamase involved in carbapenem resistance in one Pseudomonas aeruginosa isolate from Belgium. In the setting of a multicenter survey of carbapenem resistance in P. aeruginosa strains in Belgian hospitals in 2013, three additional OXA-198-producing P. aeruginosa isolates originating from patients hospitalized in one hospital were detected. To reveal the molecular mechanism underlying the reduced susceptibility to carbapenems, MIC determinations, whole-genome sequencing, and PCR analyses to confirm the genetic organization were performed. The plasmid harboring the blaOXA-198 gene was characterized, along with the genetic relatedness of the four P. aeruginosa isolates. The blaOXA-198 gene was harbored on a class 1 integron carried by an ∼49-kb IncP-type plasmid proposed as IncP-11. The same plasmid was present in all four P. aeruginosa isolates. Multilocus sequence typing revealed that the isolates all belonged to sequence type 446, and single-nucleotide polymorphism analysis revealed only a few differences between the isolates. This report describes the structure of a 49-kb plasmid harboring the blaOXA-198 gene and presents the first description of OXA-198-producing P. aeruginosa isolates associated with a hospital-associated cluster episode.
Insights
Carbapenemase-producing bacteria are a growing global concern. This study identifies a specific carbapenem resistance mechanism, OXA-198, in Pseudomonas aeruginosa isolates within a Belgian hospital, linked to a common plasmid.
Area of Science:
- Microbiology
- Genetics
- Infectious Diseases
Background:
- Carbapenemase-producing bacteria, particularly Pseudomonadaceae, are a significant global health threat.
- Mechanisms of carbapenem resistance are diverse and vary by bacterial species and region.
- OXA-198 is a plasmid-encoded class D beta-lactamase previously identified in Pseudomonas aeruginosa.
Purpose of the Study:
- To investigate the molecular basis of carbapenem resistance in newly identified OXA-198-producing Pseudomonas aeruginosa isolates.
- To characterize the plasmid carrying the blaOXA-198 gene and the genetic relatedness of the isolates.
- To report the first description of a hospital-associated cluster of OXA-198-producing Pseudomonas aeruginosa.
Main Methods:
- Minimum Inhibitory Concentration (MIC) determination for antibiotic susceptibility testing.
- Whole-genome sequencing (WGS) to identify resistance genes and genetic variations.
- Polymerase Chain Reaction (PCR) analysis to confirm genetic organization.
- Plasmid characterization, including size and type.
- Multilocus Sequence Typing (MLST) to determine isolate relatedness.
Main Results:
- Four OXA-198-producing Pseudomonas aeruginosa isolates were detected in a Belgian hospital.
- The blaOXA-198 gene was located on a class 1 integron within a ~49-kb IncP-type plasmid (proposed as IncP-11).
- All four isolates harbored the same IncP-11 plasmid and belonged to Multilocus Sequence Type 446 (ST446).
- Single-nucleotide polymorphism (SNP) analysis indicated minimal genetic divergence among the isolates.
Conclusions:
- The study elucidates the genetic structure of the ~49-kb plasmid carrying the blaOXA-198 gene.
- It confirms a hospital-associated cluster of ST446 Pseudomonas aeruginosa isolates producing OXA-198.
- This highlights the importance of ongoing surveillance for carbapenem resistance mechanisms in healthcare settings.
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