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Updated: Feb 12, 2026

A Computational Method to Quantify Fly Circadian Activity
Published on: October 28, 2017
CK1/Doubletime activity delays transcription activation in the circadian clock
Deniz Top1, Jenna L O'Neil1, Gregory E Merz2
1Laboratory of Genetics, The Rockefeller University, New York, United States.
Abstract:
In the Drosophila circadian clock, Period (PER) and Timeless (TIM) proteins inhibit Clock-mediated transcription of per and tim genes until PER is degraded by Doubletime/CK1 (DBT)-mediated phosphorylation, establishing a negative feedback loop. Multiple regulatory delays within this feedback loop ensure ~24 hr periodicity. Of these delays, the mechanisms that regulate delayed PER degradation (and Clock reactivation) remain unclear. Here we show that phosphorylation of certain DBT target sites within a central region of PER affect PER inhibition of Clock and the stability of the PER/TIM complex. Our results indicate that phosphorylation of PER residue S589 stabilizes and activates PER inhibitory function in the presence of TIM, but promotes PER degradation in its absence. The role of DBT in regulating PER activity, stabilization and degradation ensures that these events are chronologically and biochemically linked, and contributes to the timing of an essential delay that influences the period of the circadian clock.
Insights
In Drosophila, Period (PER) protein phosphorylation by Doubletime/CK1 (DBT) regulates its degradation and activity. This phosphorylation fine-tunes the circadian clock
Area of Science:
- Circadian biology
- Molecular genetics
- Drosophila melanogaster model system
Background:
- The Drosophila circadian clock relies on a negative feedback loop involving Period (PER) and Timeless (TIM) proteins.
- PER/TIM complexes inhibit transcription of their own genes, but PER degradation is essential for clock cycling.
- Mechanisms governing the delayed degradation of PER remain incompletely understood.
Purpose of the Study:
- To investigate the role of Doubletime/CK1 (DBT) phosphorylation in regulating PER protein activity and stability.
- To elucidate how specific phosphorylation events influence PER's interaction with TIM and its function in the circadian feedback loop.
Main Methods:
- Phosphorylation site analysis of PER protein.
- Assessment of PER protein stability and degradation pathways.
- Evaluation of PER's inhibitory function on Clock-mediated transcription.
- Analysis of PER/TIM complex stability.
Main Results:
- Phosphorylation of specific DBT target sites in PER's central region impacts its interaction with Clock and PER/TIM complex stability.
- Phosphorylation of PER residue S589 stabilizes PER and enhances its inhibitory function when complexed with TIM.
- Conversely, S589 phosphorylation promotes PER degradation in the absence of TIM.
Conclusions:
- DBT-mediated phosphorylation of PER is a critical regulatory mechanism linking PER activity, stabilization, and degradation.
- These phosphorylation events contribute to a key temporal delay within the circadian feedback loop, influencing the clock's ~24-hour period.
- Understanding these molecular events provides insight into the precise timing of circadian rhythms.
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