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Visualization and Quantification of Brown and Beige Adipose Tissues in Mice using [18F]FDG Micro-PET/MR Imaging
Published on: July 1, 2021
Rapid Contour-based Segmentation for 18F-FDG PET Imaging of Lung Tumors by Using ITK-SNAP: Comparison to Expert-based
Florent L Besson1, Théophraste Henry1, Céline Meyer1
1From the Department of Biophysics and Nuclear Medicine, Bicêtre University Hospital, Assistance Publique-Hôpitaux de Paris, 78 rue du Général Leclerc, 94275 Le Kremlin-Bicêtre, France (F.L.B., T.H., C.M., V.C., V.R., G.G., M.C., P.C.R., E.D.); IR4M-UMR 8081, Université Paris Saclay, Université Paris Sud, CNRS, Orsay, France (F.L.B., E.D.); Service Hospitalier Frédéric Joliot, CEA, Université Paris-Sud, Orsay, France (E.B., V.A., V.L.); Department of Nuclear Medicine, Hôpital Marie Lannelongue, Le Plessis Robinson, France (L.M.); Université Paris-Sud, Faculté de Médecine, Université Paris-Saclay, Le Kremlin-Bicêtre, France (F.P., A.S., S.B., D.M., M.H.); Service de Pneumologie, Hôpital Bicêtre, AP-HP, Le Kremlin-Bicêtre, France (F.P., A.S., S.B., D.M., M.H.); and INSERM UMR_S 999, Hôpital Marie Lannelongue, Le Plessis Robinson, France (F.P., A.S., S.B., D.M., M.H.).
ITK-SNAP software accurately segments complex lung tumors in fluorodeoxyglucose (FDG) positron emission tomography (PET) scans. This automated method outperforms traditional thresholding techniques, offering reliable results for thoracic PET tumor delineation.
Area of Science:
- Medical Imaging
- Radiology
- Oncology
Background:
- Accurate segmentation of lung tumors in fluorodeoxyglucose (FDG) positron emission tomography (PET) is crucial for treatment planning and response assessment.
- Complex tumor shapes present challenges for automated segmentation methods.
- Current standard methods, like thresholding, often lack precision.
Purpose of the Study:
- To evaluate the performance of ITK-SNAP software for segmenting complex-shaped lung tumors in FDG PET images.
- To compare ITK-SNAP's accuracy against an expert-based manual segmentation reference standard.
- To assess ITK-SNAP's reliability and compare it with established PET tumor delineation techniques.
Main Methods:
- Retrospective analysis of 76 FDG PET scans of thoracic lesions.
- Segmentation using ITK-SNAP's active contour algorithm by four raters, each performing segmentation twice.
- Establishment of an optimized reference standard using simultaneous truth and performance level estimation (STAPLE) algorithm with six expert raters.
- Assessment of accuracy using Dice coefficient and Hausdorff distance.
- Evaluation of interrater and intrarater reliability using intraclass correlation coefficients (ICCs).
- Comparison with thresholding methods (VOI41 and VOI50).
Main Results:
- ITK-SNAP demonstrated high accuracy with a Dice coefficient of 0.83 and a Hausdorff distance of 12.6 mm.
- Excellent interrater reliability (ICC = 0.94) and intrarater reliability (ICC > 0.97) were observed.
- Traditional thresholding methods (VOI41, VOI50) showed significantly lower accuracy (Dice coefficients of 0.48 and 0.34, respectively).
- ITK-SNAP outperformed VOI41 and VOI50 in both Dice coefficient and Hausdorff distance metrics.
Conclusions:
- ITK-SNAP software provides accurate and reliable segmentation for heterogeneous thoracic PET tumors using active contours.
- The software surpasses currently recommended threshold-based PET tumor delineation methods.
- ITK-SNAP offers a robust tool for precise tumor segmentation in clinical oncology.
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