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XPD-The Lynchpin of NER: Molecule, Gene, Polymorphisms, and Role in Colorectal Carcinogenesis
Aga Syed Sameer1, Saniya Nissar2
1Department of Basic Medical Sciences, College of Medicine, King Saud bin Abdulaziz University for Health Sciences, Jeddah, Saudi Arabia.
Abstract:
In mammals the bulky DNA adduct lesions known to result in deleterious phenotypes are acted upon and removed from the genomic DNA by nucleotide excision repair (NER) pathway. TFIIH multi-protein complex with its important helicase-Xeroderma Pigmentosum Protein (XPD) serves as the pivotal factor for opening up of the damaged lesion DNA site and carry out the repair process. The initial damage verification step of the TFIIH is in part dependent upon the helicase activity of XPD. Besides, XPD is also actively involved in the initiation steps of transcription and in the regulation of the cell cycle and apoptosis. In this review, we will be exploring the new insights in scientific research on the functioning of the NER pathway, the role of TFIIH as the central complex of NER, the pivotal helicase XPD as the lynchpin of NER and the effects of various single nucleotide polymorphisms (SNPs) of XPD on its functioning and their consequent role in colorectal carcinogenesis.
Insights
The nucleotide excision repair (NER) pathway removes DNA damage. This review explores the role of TFIIH complex and its XPD helicase in DNA repair, transcription, and cell cycle, focusing on XPD
Area of Science:
- Molecular Biology
- Genetics
- Cancer Research
Background:
- DNA adduct lesions can cause harmful phenotypes in mammals.
- The nucleotide excision repair (NER) pathway removes these DNA lesions.
- TFIIH, a multi-protein complex, is crucial for NER, with its XPD helicase activity vital for DNA repair initiation.
Purpose of the Study:
- To review new insights into the functioning of the NER pathway.
- To explore the role of the TFIIH complex as a central component of NER.
- To examine the pivotal role of the XPD helicase in NER and its association with colorectal carcinogenesis.
Main Methods:
- Literature review of scientific research on NER pathway.
- Analysis of the function of TFIIH and XPD helicase.
- Investigation into the impact of XPD single nucleotide polymorphisms (SNPs) on its function and colorectal cancer.
Main Results:
- XPD helicase activity is essential for TFIIH's damage verification and DNA repair initiation.
- XPD is involved in transcription initiation, cell cycle regulation, and apoptosis.
- Specific XPD SNPs may influence its function and contribute to colorectal carcinogenesis.
Conclusions:
- The NER pathway, TFIIH, and XPD are critical for maintaining genomic integrity.
- Dysregulation of XPD function due to SNPs can impact cellular processes and cancer development.
- Further research into XPD's role is vital for understanding and potentially treating colorectal cancer.
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