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Related Experiment Video

Updated: Feb 12, 2026

Comprehensive Workflow for the Genome-wide Identification and Expression Meta-analysis of the ATL E3 Ubiquitin Ligase Gene Family in Grapevine
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The grapevine kinome: annotation, classification and expression patterns in developmental processes and stress

Kaikai Zhu1,2, Xiaolong Wang1,2, Jinyi Liu1

  • 11College of Horticulture, Nanjing Agricultural University, Nanjing, Jiangsu 210095 China.

Horticulture Research
|April 6, 2018
PubMed
Summary

This study identifies and annotates 1168 grapevine protein kinase (PK) genes, revealing their distribution, evolution, and expression patterns. This provides a foundation for understanding grapevine kinase functions in development and stress responses.

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Area of Science:

  • Plant molecular biology
  • Genomics
  • Bioinformatics

Background:

  • Protein kinases (PKs) are crucial regulators of cellular functions.
  • Functional characterization of plant PKs remains limited, even in model species.

Purpose of the Study:

  • To identify and annotate the complete grapevine kinome.
  • To analyze the evolutionary expansion and expression patterns of grapevine PK genes.

Main Methods:

  • Bioinformatic analysis of the grapevine genome.
  • Identification and classification of PK-encoding genes.
  • Analysis of gene duplication events and expression patterns.

Main Results:

  • Identified 1168 PK-encoding genes in grapevine, classified into 20 groups and 121 families.
  • The RLK-Pelle group is the largest, comprising 872 members.
  • Gene distribution, duplication events (tandem and segmental), and expression patterns under development and stress were characterized.

Conclusions:

  • The comprehensive grapevine kinome annotation provides insights into gene evolution and function.
  • Understanding grapevine kinase roles in development, stress response, and evolution is facilitated.
  • This resource aids future functional studies of grapevine PKs.