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Updated: Feb 12, 2026

A Rapid Image-based Bacterial Virulence Assay Using Amoeba
Published on: June 27, 2018
Response of testate amoebae to a late Holocene ecosystem shift in an Amazonian peatland
Graeme T Swindles1, Thomas J Kelly1, Katherine H Roucoux2
1School of Geography, University of Leeds, UK.
Abstract:
To date there have only been two studies using testate amoebae as palaeoecological indicators in tropical peatlands. Here we present a new ∼500-year testate amoeba record from San Jorge, a domed peatland in Peruvian Amazonia, which has a well-constrained vegetation history based on pollen analysis. We observe a major shift from Hyalosphenia subflava to Cryptodifflugia oviformis-dominated communities at ∼50 cm depth (c. AD 1760), which suggests a change to drier conditions in the peatland. The application of a statistical transfer function also suggests a deepening of the water table at this time. The transition in the microbial assemblage occurs at a time when pollen and geochemical data indicate drier conditions (reduced influence of river flooding), leading to an ecosystem switch to more ombrotrophic-like conditions in the peatland. Our work illustrates the potential of testate amoebae as important tools in tropical peatland palaeoecology, and the power of multiproxy approaches for understanding the long-term development of tropical peatlands.
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