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Updated: Feb 12, 2026

Molecular Imaging of Human Brain Organoids Using Mass Spectrometry
Published on: September 27, 2024
Molecular composition of the human primary visual cortex profiled by multimodal mass spectrometry imaging
Estibaliz González de San Román1,2, Hans-Jürgen Bidmon2, Milena Malisic1,2
1Central Institute of Engineering, Electronics and Analytics, ZEA-3, Forschungszentrum Jülich, Jülich, Germany.
Mass spectrometry imaging reveals novel molecular markers in the human primary visual cortex (V1). These findings offer a new molecule-based approach for mapping brain regions and their functions.
Area of Science:
- Neuroscience
- Biochemistry
- Analytical Chemistry
Background:
- The primary visual cortex (V1) is well-characterized but its molecular architecture remains incompletely understood.
- V1's unique laminar structure, including the Gennari stripe, makes it ideal for molecular mapping.
- Novel methods are needed to identify molecular markers for functional cortical parcellation.
Purpose of the Study:
- To investigate the distribution of lipids, proteins, and metals in human V1 using multimodal mass spectrometry imaging.
- To identify novel biomolecular and elemental markers for laminar and inter-areal differences within the visual cortex.
- To assess the potential of mass spectrometry imaging for molecule-based cortical parcellation.
Main Methods:
- Histological sections from three post-mortem human brains were analyzed.
- Matrix-assisted laser desorption/ionization mass spectrometry imaging and laser ablation inductively coupled plasma mass spectrometry imaging were employed.
- In situ tandem mass spectrometry and high-accuracy mass measurements were used for peptide and lipid identification.
Main Results:
- 71 peptides from 13 proteins were identified, with 5 showing differential laminar distribution, demarcating V1/V2 borders.
- 123 lipid species were identified, with over 20 exhibiting differential distribution, including specific lipids labeling distinct layers (IVa, IVb, IVc).
- Elemental imaging revealed specific copper accumulation in layer IV, and lipids clearly separated V1 from V2.
Conclusions:
- Multimodal mass spectrometry imaging successfully identified novel biomolecular and elemental markers in human V1.
- These markers exhibit specific laminar and inter-areal distribution patterns.
- Mass spectrometry imaging presents a promising new avenue for molecule-based, multimodal cortical parcellation.
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