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Single-Molecule Test for Markovianity of the Dynamics along a Reaction Coordinate
Alexander M Berezhkovskii1, Dmitrii E Makarov2,3
1Mathematical and Statistical Computing Laboratory, Office of Intramural Research, Center for Information Technology , National Institutes of Health , Bethesda , Maryland 20892 , United States.
Abstract:
In an effort to answer the much-debated question of whether the time evolution of common experimental observables can be described as one-dimensional diffusion in the potential of mean force, we propose a simple criterion that allows one to test whether the Markov assumption is applicable to a single-molecule trajectory x( t). This test does not involve fitting of the data to any presupposed model and can be applied to experimental data with relatively low temporal resolution.
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