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Updated: Feb 12, 2026

Monitoring Equilibrium Changes in RNA Structure by 'Peroxidative' and 'Oxidative' Hydroxyl Radical Footprinting
Published on: October 17, 2011
Isoprene photo-oxidation products quantify the effect of pollution on hydroxyl radicals over Amazonia
Yingjun Liu1, Roger Seco2, Saewung Kim2
1School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA.
Abstract:
Nitrogen oxides (NO ) emitted from human activities are believed to regulate the atmospheric oxidation capacity of the troposphere. However, observational evidence is limited for the low-to-median NO concentrations prevalent outside of polluted regions. Directly measuring oxidation capacity, represented primarily by hydroxyl radicals (OH), is challenging, and the span in NO concentrations at a single observation site is often not wide. Concentrations of isoprene and its photo-oxidation products were used to infer the equivalent noontime OH concentrations. The fetch at an observation site in central Amazonia experienced varied contributions from background regional air, urban pollution, and biomass burning. The afternoon concentrations of reactive nitrogen oxides (NO ), indicative of NO exposure during the preceding few hours, spanned from 0.3 to 3.5 parts per billion. Accompanying the increase of NO concentration, the inferred equivalent noontime OH concentrations increased by at least 250% from 0.6 × 106 to 1.6 × 106 cm-3. The conclusion is that, compared to background conditions of low NO concentrations over the Amazon forest, pollution increased NO concentrations and amplified OH concentrations, indicating the susceptibility of the atmospheric oxidation capacity over the forest to anthropogenic influence and reinforcing the important role of NO in sustaining OH concentrations.
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