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Updated: Feb 11, 2026

Development of Compendium for Esophageal Squamous Cell Carcinoma
Published on: April 12, 2024
Aberrant methylation of EYA4 promotes epithelial-mesenchymal transition in esophageal squamous cell carcinoma
Mei Luo1, Yuan Li1, Xuejiao Shi1
1Department of Thoracic Surgery, National Cancer Center/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Abstract:
EYA4, one of the four members of the EYA gene family, is associated with several human cancers. However, its biological functions and molecular mechanisms in the progression of cancer, particularly in esophageal squamous cell carcinoma (ESCC), remain unknown. In the present study, we found that EYA4 was underexpressed and hypermethylated in most of the ESCC cell lines tested (85.7%, 6/7). Treatment with 5-aza-dC and/or trichostatin A (TSA) restored EYA4 expression in ESCC cell lines, which indicates that EYA4 expression was epigenetically regulated. Similarly, EYA4 was aberrantly hypermethylated in ESCC tissues (78%, 39/50) and downregulation of EYA4 occurred in approximately 65% of primary ESCC at protein level where it was associated significantly with TNM stage and lymph node metastases. Knockdown of EYA4 in KYSE30 and KYSE70 ESCC cells using small hairpin RNA increased migration and invasive motility in vitro. Conversely, the overexpression of EYA4 in KYSE180 and KYSE450 promoted an epithelial phenotype, which consisted of decreased migration and invasion abilities and a decrease in TGF-β1-induced epithelial-mesenchymal transition. Mechanistically, EYA4 overexpression reduced the phosphorylation of Akt and glycogen synthase kinase (GSK) 3β, which led to the inactivation of slug. In addition, we found that TGF-β1 decreased EYA4 expression in both a dose-dependent and a time-dependent manner in KYSE30 cells, accompanied by an increase in the expression of DNA methyltransferases, especially DNMT3A. In summary, EYA4 is frequently hypermethylated in ESCC and may function as a tumor suppressor gene in the development of ESCC.
Insights
EYA4 gene hypermethylation frequently occurs in esophageal squamous cell carcinoma (ESCC), leading to its underexpression. Restoring EYA4 suppresses ESCC cell migration and invasion, indicating its tumor suppressor role.
Area of Science:
- Oncology
- Molecular Biology
- Epigenetics
Background:
- The EYA gene family, including EYA4, is implicated in human cancers.
- The specific role and mechanisms of EYA4 in esophageal squamous cell carcinoma (ESCC) progression are largely unknown.
Purpose of the Study:
- To investigate the expression, epigenetic regulation, and functional role of EYA4 in ESCC.
- To elucidate the molecular mechanisms underlying EYA4's function in ESCC development.
Main Methods:
- Analysis of EYA4 expression and methylation in ESCC cell lines and tissues.
- In vitro studies using knockdown and overexpression of EYA4 in ESCC cell lines.
- Investigation of signaling pathways, including Akt, GSK3β, and TGF-β1, and their interaction with EYA4.
Main Results:
- EYA4 was found to be underexpressed and hypermethylated in most ESCC cell lines and tissues.
- Epigenetic regulators (5-aza-dC, TSA) restored EYA4 expression, confirming epigenetic control.
- Downregulation of EYA4 correlated with advanced TNM stage and lymph node metastasis.
- EYA4 knockdown increased ESCC cell migration and invasion; EYA4 overexpression reduced these abilities and TGF-β1-induced epithelial-mesenchymal transition.
- EYA4 modulated the Akt/GSK3β/Slug pathway, and TGF-β1 decreased EYA4 expression via DNMT3A.
Conclusions:
- EYA4 is frequently hypermethylated and downregulated in ESCC.
- EYA4 acts as a tumor suppressor gene in ESCC by inhibiting cell migration, invasion, and epithelial-mesenchymal transition.
- Epigenetic silencing of EYA4 contributes to ESCC progression.
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