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Updated: Feb 11, 2026

RNA Pull-down Procedure to Identify RNA Targets of a Long Non-coding RNA
Published on: April 10, 2018
Long non-protein coding RNA DANCR functions as a competing endogenous RNA to regulate osteoarthritis progression via
Xiaochen Fan1, Jishan Yuan1, Jun Xie1
1Department of Orthopaedics, Affiliated Zhenjiang First Hospital of Jiangsu University, Zhenjiang 212002, China.
Abstract:
Long noncoding RNAs (lncRNAs) have been known to be involved in multiple diverse diseases, including osteoarthritis (OA). This study aimed to explore the role of differentiation antagonizing non-protein coding RNA (DANCR) in OA and identify the potential molecular mechanisms. The expression of DANCR in cartilage samples from patients with OA was detected using quantitative reverse transcription-polymerase chain reaction. The effects of DANCR on the viability of OA chondrocytes and apoptosis were explored using cell counting kit 8 assay and flow cytometry assay, respectively. Additionally, the interaction among DANCR, miR-577, and SphK2 was explored using dual-luciferase reporter and RIP assays. The present study found that DANCR was significantly upregulated in patients with OA. Functional assays demonstrated that DANCR inhibition suppressed the proliferation of OA chondrocytes and induced cell apoptosis. The study also showed that DANCR acted as a competitive endogenous RNA to sponge miR-577, which targeted the mRNA of SphK2 to regulate the survival of OA chondrocytes. In conclusion, the study revealed that lncRNA DANCR might promote the proliferation of OA chondrocytes and reduce apoptosis through the miR-577/SphK2 axis. Thus, lncRNA DANCR might be considered as a potential therapeutic target for OA treatment.
Insights
Long noncoding RNA (lncRNA) DANCR is upregulated in osteoarthritis (OA). Inhibiting DANCR reduces OA chondrocyte proliferation and increases apoptosis via the miR-577/SphK2 pathway, suggesting DANCR as a potential OA therapeutic target.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Long noncoding RNAs (lncRNAs) play critical roles in various diseases.
- Osteoarthritis (OA) is a debilitating joint disease with complex molecular underpinnings.
- Understanding the role of specific lncRNAs in OA pathogenesis is crucial for developing new treatments.
Purpose of the Study:
- To investigate the role of differentiation antagonizing non-protein coding RNA (DANCR) in osteoarthritis.
- To elucidate the molecular mechanisms by which DANCR influences OA chondrocytes.
- To explore the potential of DANCR as a therapeutic target for OA.
Main Methods:
- Quantitative reverse transcription-polymerase chain reaction (qRT-PCR) to measure DANCR expression in OA cartilage.
- Cell counting kit 8 (CCK-8) assay to assess chondrocyte viability.
- Flow cytometry to evaluate chondrocyte apoptosis.
- Dual-luciferase reporter and RNA immunoprecipitation (RIP) assays to confirm interactions between DANCR, miR-577, and SphK2.
Main Results:
- DANCR expression was significantly upregulated in OA cartilage samples compared to controls.
- Inhibition of DANCR suppressed the proliferation of OA chondrocytes and induced apoptosis.
- DANCR functions as a competing endogenous RNA (ceRNA) by sponging miR-577.
- miR-577 targets the mRNA of Sphingosine kinase 2 (SphK2), thereby regulating OA chondrocyte survival.
Conclusions:
- lncRNA DANCR promotes OA chondrocyte proliferation and inhibits apoptosis through the miR-577/SphK2 axis.
- The findings identify a novel regulatory pathway involving DANCR, miR-577, and SphK2 in OA.
- lncRNA DANCR represents a potential therapeutic target for osteoarthritis treatment.
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