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Updated: Feb 11, 2026

Rapid Evaluation of Toxicity of Chemical Compounds Using Zebrafish Embryos
Published on: August 25, 2019
A systematic toxicity evaluation of cephalosporins via transcriptomics in zebrafish and in silico ADMET studies
Ying Han1, Jingpu Zhang2, Changqin Hu1
1Division of Antibiotics, National Institutes for Food and Drug Control, Beijing 102629, China.
Abstract:
Cephalosporins are beta-lactam antibiotics that are widely used in clinics in China. However, information on their toxicity to zebrafish is limited. This study reports that the toxicity effects of cephalosporins containing an N-methyltetrazolthio ring at the C-3 position (CNMTs) exposure on zebrafish were comparable to those predicted by in silico analysis. The effects of CNMTs on the mortality and malformation rate of zebrafish were concentration-dependent. The transcriptional levels of the has1 and cnnm2a genes, which are related to embryo development and absorption of Mg2+ in vivo, significantly changed. Several pathways that were enriched by differentially expressed genes (DEGs) were identified, and the most significantly co-enriched pathways were related to neuroactive ligand-receptor interactions, cardiac muscle contraction, and vascular smooth muscle contraction. In sum, the C-3 substituent in the nucleus 7-aminocephalosporanic acid (7-ACA) of CNMTs is responsible for the observed toxicity at higher concentrations, and the C-7 substituent plays an important role in toxicity at lower concentrations. Our results show that zebrafish embryos and transcriptomics may be useful for determining target organ toxicity, assessing the structure and toxicity relationship of chemicals, and improving drug safety assessments.
Insights
Cephalosporins with an N-methyltetrazolthio ring (CNMTs) showed concentration-dependent toxicity in zebrafish, affecting mortality and gene expression. Zebrafish embryos offer a valuable model for assessing chemical toxicity and improving drug safety.
Area of Science:
- Pharmacology and Toxicology
- Developmental Biology
- Genomics
Background:
- Cephalosporins are widely used beta-lactam antibiotics.
- Limited data exists on zebrafish toxicity of specific cephalosporin structures.
- Cephalosporins containing an N-methyltetrazolthio ring at the C-3 position (CNMTs) are of particular interest.
Purpose of the Study:
- To investigate the toxicity of CNMTs on zebrafish embryos.
- To compare in vivo zebrafish toxicity with in silico predictions.
- To identify molecular pathways affected by CNMTs exposure.
Main Methods:
- Exposure of zebrafish embryos to varying concentrations of CNMTs.
- Assessment of mortality and malformation rates.
- Transcriptomic analysis to measure gene expression changes (has1, cnnm2a) and identify differentially expressed genes (DEGs).
- In silico toxicity prediction analysis.
Main Results:
- CNMTs toxicity was concentration-dependent, aligning with in silico predictions.
- Significant changes in has1 and cnnm2a gene expression were observed.
- Enriched pathways included neuroactive ligand-receptor interactions, cardiac, and vascular smooth muscle contraction.
- C-3 and C-7 substituents of 7-aminocephalosporanic acid (7-ACA) were linked to toxicity at different concentrations.
Conclusions:
- Zebrafish embryos provide a robust model for evaluating chemical toxicity and structure-activity relationships.
- Transcriptomic analysis aids in identifying target organ toxicity.
- The study enhances drug safety assessment methodologies.
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