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Updated: Feb 11, 2026

Fluorescence-Based Detection of FEN1 Nuclease Activity and Screening of Small-Molecule Inhibitors
Published on: June 27, 2025
A high-content screen for small-molecule regulators of epithelial cell-adhesion molecule (EpCAM) cleavage yields a
Jana Ylva Tretter1, Kenji Schorpp2, Elke Luxenburger3
1From the Institute of Structural Biology and.
Abstract:
Epithelial cell-adhesion molecule (EpCAM) is a transmembrane protein that regulates cell cycle progression and differentiation and is overexpressed in many carcinomas. The EpCAM-induced mitogenic cascade is activated via regulated intramembrane proteolysis (RIP) of EpCAM by ADAM and γ-secretases, generating the signaling-active intracellular domain EpICD. Because of its expression pattern and molecular function, EpCAM is a valuable target in prognostic and therapeutic approaches for various carcinomas. So far, several immunotherapeutic strategies have targeted the extracellular domain of EpCAM. However, targeting the intracellular signaling cascade of EpCAM holds promise for specifically interfering with EpCAM's proliferation-stimulating signaling cascade. Here, using a yellow fluorescence protein-tagged version of the C-terminal fragment of EpCAM, we established a high-content screening (HCS) of a small-molecule compound library (n = 27,280) and characterized validated hits that target EpCAM signaling. In total, 128 potential inhibitors were initially identified, of which one compound with robust inhibitory effects on RIP of EpCAM was analyzed in greater detail. In summary, our study demonstrates that the development of an HCS for small-molecule inhibitors of the EpCAM signaling pathway is feasible. We propose that this approach may also be useful for identifying chemical compounds targeting other disorders involving membrane cleavage-dependent signaling pathways.
Insights
Researchers developed a high-content screening method to find small molecules that inhibit the Epithelial cell-adhesion molecule (EpCAM) signaling pathway. This approach successfully identified inhibitors targeting EpCAM
Area of Science:
- Oncology
- Molecular Biology
- Biochemistry
Background:
- Epithelial cell-adhesion molecule (EpCAM) is a transmembrane protein crucial for cell cycle progression and differentiation.
- Overexpressed in many carcinomas, EpCAM drives proliferation via a mitogenic cascade involving regulated intramembrane proteolysis (RIP).
- Targeting EpCAM's intracellular signaling offers a promising therapeutic strategy beyond current extracellular domain-focused immunotherapies.
Purpose of the Study:
- To establish a high-content screening (HCS) assay for identifying small-molecule inhibitors of the EpCAM signaling pathway.
- To characterize compounds that interfere with EpCAM's regulated intramembrane proteolysis (RIP).
- To validate the feasibility of HCS for discovering inhibitors of membrane cleavage-dependent signaling.
Main Methods:
- Development of an HCS assay using a yellow fluorescence protein-tagged EpCAM C-terminal fragment.
- Screening of a small-molecule compound library (n = 27,280).
- Characterization of validated hits, with detailed analysis of one potent inhibitor of EpCAM RIP.
Main Results:
- Identification of 128 potential EpCAM signaling inhibitors from the compound library.
- Discovery of one compound exhibiting robust inhibitory effects on EpCAM regulated intramembrane proteolysis (RIP).
- Demonstration of the feasibility of using HCS to find inhibitors for the EpCAM signaling pathway.
Conclusions:
- The developed HCS assay is effective for identifying small-molecule inhibitors of the EpCAM signaling pathway.
- Targeting EpCAM's intracellular signaling cascade via RIP inhibition is a viable therapeutic strategy.
- This HCS approach can be adapted to discover inhibitors for other signaling pathways involving membrane cleavage.
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