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Updated: Feb 11, 2026

Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
Hedgehog signaling negatively co-regulates BH3-only protein Noxa and TAp73 in TP53-mutated cells
Michael Torsten Meister1, Cathinka Boedicker2, Thomas Klingebiel3
1Institute for Experimental Cancer Research in Pediatrics, Goethe-University Frankfurt, Komturstr. 3a, 60528, Frankfurt, Germany; German Cancer Consortium (DKTK), Partner Site Frankfurt, Germany; German Cancer Research Center (DKFZ), Heidelberg, Germany; Division of Pediatric Hematology and Oncology, Hospital for Children and Adolescents, Johann Wolfgang Goethe-University, Frankfurt, Germany.
Abstract:
In the present study, we show that pharmacological repression by the Hedgehog (Hh) pathway inhibitor (HPI) GANT61 induces expression of the proapoptotic protein Noxa in TP53-mutated embryonal pediatric tumor cells driven by Hh signaling (i.e. rhabdomyosarcoma (RMS) and medulloblastoma (MB)). Similarly, genetic silencing of Gli1 by siRNA causes increased Noxa mRNA and protein levels, while overexpression of Gli1 results in decreased Noxa expression. Furthermore, TAp73 mRNA and protein levels are increased upon Gli1 knockdown, while Gli1 overexpression reduces TAp73 mRNA and protein levels. However, knockdown of TAp73 fails to block Noxa induction in GANT61-treated cells, suggesting that Noxa is not primarily regulated by TAp73. Interestingly, mRNA levels of the transcription factor EGR1 correlate with those of Noxa and TAp73. Silencing of EGR1 results in decreased Noxa and TAp73 mRNA levels, indicating that EGR1 is involved in regulating transcriptional activity of Noxa and TAp73. These findings suggest that Gli1 represses Noxa and TAp73, possibly via EGR1. These findings could be exploited for the treatment of Hh-driven tumors, e.g. for their sensitization to chemotherapeutic agents.
Insights
Pharmacological repression of the Hedgehog (Hh) pathway induces the proapoptotic protein Noxa in pediatric tumors. Gli1 represses Noxa and TAp73, potentially via EGR1, offering new therapeutic strategies.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Signaling
Background:
- The Hedgehog (Hh) signaling pathway is implicated in various cancers, including embryonal pediatric tumors like rhabdomyosarcoma (RMS) and medulloblastoma (MB).
- TP53 mutations are common in these aggressive tumors, affecting cellular response to damage and apoptosis.
- Understanding the regulatory mechanisms of proapoptotic proteins within Hh-driven tumors is crucial for developing targeted therapies.
Purpose of the Study:
- To investigate the effect of Hedgehog (Hh) pathway inhibition on the expression of the proapoptotic protein Noxa in TP53-mutated pediatric tumor cells.
- To elucidate the role of Gli1, a key transcription factor in the Hh pathway, in regulating Noxa and TAp73 expression.
- To identify potential downstream mediators, such as EGR1, involved in the Hh pathway's control of Noxa and TAp73.
Main Methods:
- Pharmacological inhibition of the Hh pathway using GANT61, a Hedgehog pathway inhibitor (HPI).
- Genetic manipulation of Gli1 expression using siRNA for silencing and overexpression techniques.
- Quantitative analysis of mRNA and protein levels for Noxa, TAp73, and EGR1 using molecular biology techniques.
- Assessment of the functional role of TAp73 and EGR1 in Noxa induction through knockdown experiments.
Main Results:
- Pharmacological repression of Hh signaling by GANT61 induced Noxa expression in TP53-mutated RMS and MB cells.
- Genetic silencing of Gli1 increased Noxa mRNA and protein levels, while Gli1 overexpression decreased them.
- Gli1 knockdown elevated TAp73 levels, whereas Gli1 overexpression reduced TAp73 levels; however, TAp73 knockdown did not inhibit GANT61-induced Noxa.
- mRNA levels of EGR1 correlated with Noxa and TAp73, and EGR1 silencing reduced Noxa and TAp73 expression, indicating EGR1's regulatory role.
Conclusions:
- Gli1 appears to repress the expression of Noxa and TAp73, potentially mediated through the transcription factor EGR1.
- These findings suggest a novel regulatory axis within Hh-driven pediatric tumors.
- The identified pathway could be therapeutically exploited to sensitize Hh-driven tumors to chemotherapy.
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