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Credibility, Replicability, and Reproducibility in Simulation for Biomedicine and Clinical Applications in
Lealem Mulugeta1, Andrew Drach2, Ahmet Erdemir3
1InSilico Labs LLC, Houston, TX, United States.
Frontiers in Neuroinformatics
|May 2, 2018
Summary
Computational neuroscience models need credibility for clinical use. This involves best practices like reproducibility, validation, and community involvement for patient applications and medical education.
Area of Science:
- Computational neuroscience
- Biomedical simulation
- Neuroscience modeling
Background:
- Current computational neuroscience models aim to understand neural systems but lack clinical applicability.
- Bridging the gap requires significant advancements and adherence to best practices for regulatory and clinical acceptance.
- Lessons can be drawn from established simulation practices in engineering and other biomedical fields.
Purpose of the Study:
- To introduce fundamental concepts for developing credible clinical neuroscience models.
- To outline procedures for mechanistic multiscale modeling.
- To explore the potential of simulation in Simulation-Based Medical Education.
Main Methods:
- Discussing core principles: reproducibility, replicability, verification, and validation.
- Detailing model configuration and credible mechanistic multiscale modeling processes.
- Highlighting the importance of community involvement for model credibility.
Main Results:
- Identified key concepts crucial for establishing credibility in clinical neuroscience models.
- Proposed a framework for developing reliable and valid multiscale models.
- Emphasized the role of community engagement in fostering trust and adoption.
Conclusions:
- Establishing credibility is paramount for translating computational neuroscience models into clinical practice.
- Adopting rigorous software engineering and validation practices is essential.
- Simulation holds significant potential for both direct patient care and Simulation-Based Medical Education.
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