Related Experiment Video
Updated: Feb 11, 2026

Culture of Piglet Intestinal 3D Organoids from Cryopreserved Epithelial Crypts and Establishment of Cell Monolayers
Published on: February 10, 2023
3D Culture Represents Apoptosis Induced by Trastuzumab Better than 2D Monolayer Culture
Takashi Tatara1,2, Toru Mukohara3,4,5, Rina Tanaka6
1Division of Medical Oncology/Hematology, Department of Medicine, Kobe University Graduate School of Medicine, Kobe, Japan.
Background:
Our hypothesis was that three-dimensional (3D) culture better represents differential in vivo responses to trastuzumab between PIK3CA-wild-type (wt) and mutant (mt) cell lines than does two-dimensional (2D) culture.
Materials And Methods:
Apoptosis and cell signaling proteins were evaluated in response to trastuzumab with and without BKM120, a pan-phosphatidylinositol 3-kinase (PI3K) inhibitor, using western blot analysis of four breast cancer cell lines with human epidermal growth factor receptor 2 (HER2) amplification.
Results:
Increased expression of cleaved poly (ADP-ribose) polymerase (PARP) was observed only in 3D-cultured PIK3CA-wt lines in response to trastuzumab, but not in 2D-cultured PIK3CA-wt or PIK3CA-mt lines. Decrease in the ratio of phosphorylated (p-)AKT to AKT in response to trastuzumab was more profound in PIK3CA-wt cells than in PIK3CA-mt cells in 3D culture, while the difference between PIK3CA genotypes was less apparent in 2D culture. Treatment with BKM120 and trastuzumab resulted in a stronger increase in cleaved PARP than either treatment alone.
Conclusion:
3D Culture appears to better represent trastuzumab-induced apoptosis and resistance to trastuzumab associated with PIK3CA mutation.
Insights
Three-dimensional (3D) cell culture better models trastuzumab response in breast cancer than 2D culture, especially regarding PIK3CA mutations. This highlights 3D culture
Area of Science:
- Oncology
- Cell Biology
- Pharmacology
Background:
- Three-dimensional (3D) cell culture may better mimic in vivo conditions compared to 2D culture for evaluating drug responses.
- Investigating differential responses to trastuzumab based on PIK3CA mutation status is crucial for personalized breast cancer therapy.
Purpose of the Study:
- To compare the efficacy of 3D versus 2D cell culture models in representing in vivo responses to trastuzumab in breast cancer cell lines with varying PIK3CA genotypes.
- To assess the impact of PIK3CA mutation status on trastuzumab-induced apoptosis and cell signaling.
Main Methods:
- Western blot analysis was used to evaluate apoptosis and cell signaling proteins.
- Four HER2-amplified breast cancer cell lines were cultured in both 3D and 2D formats.
- Cells were treated with trastuzumab alone and in combination with BKM120 (a PI3K inhibitor).
Main Results:
- 3D culture demonstrated increased trastuzumab-induced apoptosis (cleaved PARP) in PIK3CA-wild-type cells, an effect not seen in 2D culture.
- The p-AKT/AKT ratio decrease upon trastuzumab treatment was more pronounced in PIK3CA-wild-type cells in 3D culture.
- Combined treatment with BKM120 and trastuzumab enhanced apoptosis compared to single-agent treatment.
Conclusions:
- 3D cell culture provides a more accurate model for studying trastuzumab-induced apoptosis and resistance mechanisms related to PIK3CA mutations in breast cancer.
- These findings support the use of 3D culture systems for preclinical evaluation of targeted therapies in breast cancer.
Related Concept Videos
The Representativeness Heuristic
Plant Tissue Culture
Apoptosis
Self Within Cultural Contexts
Cell Culture
The Role of Culture

