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Self-Resistance during Muraymycin Biosynthesis: a Complementary Nucleotidyltransferase and Phosphotransferase with
Zheng Cui1, Xia-Chang Wang1, Xiaodong Liu1
1Department of Pharmaceutical Sciences, College of Pharmacy, University of Kentucky, Lexington, Kentucky, USA.
Abstract:
Muraymycins are antibacterial natural products from Streptomyces spp. that inhibit translocase I (MraY), which is involved in cell wall biosynthesis. Structurally, muraymycins consist of a 5'-C-glycyluridine (GlyU) appended to a 5″-amino-5″-deoxyribose (ADR), forming a disaccharide core that is found in several peptidyl nucleoside inhibitors of MraY. For muraymycins, the GlyU-ADR disaccharide is further modified with an aminopropyl-linked peptide to generate the simplest structures, annotated as the muraymycin D series. Two enzymes encoded in the muraymycin biosynthetic gene cluster, Mur29 and Mur28, were functionally assigned in vitro as a Mg·ATP-dependent nucleotidyltransferase and a Mg·ATP-dependent phosphotransferase, respectively, both modifying the 3″-OH of the disaccharide. Biochemical characterization revealed that both enzymes can utilize several nucleotide donors as cosubstrates and the acceptor substrate muraymycin also behaves as an inhibitor. Single-substrate kinetic analyses revealed that Mur28 preferentially phosphorylates a synthetic GlyU-ADR disaccharide, a hypothetical biosynthetic precursor of muraymycins, while Mur29 preferentially adenylates the D series of muraymycins. The adenylated or phosphorylated products have significantly reduced (170-fold and 51-fold, respectively) MraY inhibitory activities and reduced antibacterial activities, compared with the respective unmodified muraymycins. The results are consistent with Mur29-catalyzed adenylation and Mur28-catalyzed phosphorylation serving as complementary self-resistance mechanisms, with a distinct temporal order during muraymycin biosynthesis.
Insights
Muraymycins are antibacterial compounds that inhibit bacterial cell wall synthesis. Enzymes Mur29 and Mur28 inactivate muraymycins through adenylation and phosphorylation, respectively, acting as self-resistance mechanisms during biosynthesis.
Area of Science:
- Microbiology
- Biochemistry
- Natural Products Chemistry
Background:
- Muraymycins are antibacterial natural products produced by *Streptomyces* species.
- They function by inhibiting translocase I (MraY), a key enzyme in bacterial cell wall biosynthesis.
- The core structure of muraymycins involves a disaccharide composed of 5'-*C*-glycyluridine (GlyU) and 5″-amino-5″-deoxyribose (ADR).
Purpose of the Study:
- To functionally characterize two enzymes, Mur29 and Mur28, involved in muraymycin biosynthesis.
- To elucidate the biochemical mechanisms by which these enzymes modify muraymycins.
- To investigate the role of these enzymatic modifications in bacterial self-resistance to muraymycins.
Main Methods:
- In vitro biochemical assays were employed to determine the enzymatic activities of Mur29 and Mur28.
- Kinetic analyses were performed using synthetic substrates and muraymycin derivatives.
- Antibacterial and enzyme inhibitory activities of modified muraymycins were assessed.
Main Results:
- Mur29 was identified as a Mg·ATP-dependent nucleotidyltransferase that adenylates muraymycins.
- Mur28 was identified as a Mg·ATP-dependent phosphotransferase that phosphorylates muraymycins.
- Both adenylated and phosphorylated muraymycins exhibited significantly reduced MraY inhibitory and antibacterial activities.
Conclusions:
- Mur29 and Mur28 catalyze complementary self-resistance mechanisms in *Streptomyces* during muraymycin biosynthesis.
- Enzymatic modification by Mur29 (adenylation) and Mur28 (phosphorylation) temporally protects the producing organism from its own antibiotic.
- These findings provide insights into the intricate regulation of natural product biosynthesis and resistance.
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