Related Experiment Video
Updated: Feb 10, 2026

The Application of 1% Methylene Blue Dye As a Single Technique in Breast Cancer Sentinel Node Biopsy
Published on: June 1, 2019
Applications of RNA Indexes for Precision Oncology in Breast Cancer
Liming Ma1, Zirui Liang1, Hui Zhou1
1Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
Abstract:
Precision oncology aims to offer the most appropriate treatments to cancer patients mainly based on their individual genetic information. Genomics has provided numerous valuable data on driver mutations and risk loci; however, it remains a formidable challenge to transform these data into therapeutic agents. Transcriptomics describes the multifarious expression patterns of both mRNAs and non-coding RNAs (ncRNAs), which facilitates the deciphering of genomic codes. In this review, we take breast cancer as an example to demonstrate the applications of these rich RNA resources in precision medicine exploration. These include the use of mRNA profiles in triple-negative breast cancer (TNBC) subtyping to inform corresponding candidate targeted therapies; current advancements and achievements of high-throughput RNA interference (RNAi) screening technologies in breast cancer; and microRNAs as functional signatures for defining cell identities and regulating the biological activities of breast cancer cells. We summarize the benefits of transcriptomic analyses in breast cancer management and propose that unscrambling the core signaling networks of cancer may be an important task of multiple-omic data integration for precision oncology.
Insights
Transcriptomics, analyzing RNA expression, aids precision oncology by revealing breast cancer subtypes and potential targeted therapies. Integrating multi-omic data is key to understanding cancer signaling networks for better patient treatment.
Area of Science:
- Molecular Biology
- Genomics
- Oncology
Background:
- Precision oncology leverages individual genetic data for tailored cancer treatments.
- Genomics provides mutation data, but translating it into therapeutics is challenging.
- Transcriptomics, studying RNA expression, helps interpret genomic information.
Purpose of the Study:
- To review the applications of RNA resources in precision medicine, using breast cancer as a model.
- To highlight how transcriptomic analysis enhances breast cancer management and targeted therapy development.
Main Methods:
- Utilizing mRNA profiles for triple-negative breast cancer (TNBC) subtyping and identifying targeted therapies.
- Reviewing advancements in high-throughput RNA interference (RNAi) screening for breast cancer research.
- Examining microRNAs as functional signatures for breast cancer cell identity and activity regulation.
Main Results:
- mRNA profiling enables TNBC subtyping, guiding candidate targeted therapy selection.
- RNAi screening technologies show progress in breast cancer research.
- MicroRNAs serve as critical regulators of breast cancer cell behavior.
Conclusions:
- Transcriptomic analyses offer significant benefits for breast cancer management.
- Integrating multiple omics data to decipher cancer signaling networks is crucial for advancing precision oncology.
Related Concept Videos
Uncertainty in Measurement: Accuracy and Precision
RNA Interference
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
RNA Structure
The basic structure of RNA consists of a five-carbon sugar and one of four nitrogenous bases. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA): messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three RNA types consist of a...
RNA Stability
Accuracy and Precision
RNA Splicing

