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Updated: Feb 10, 2026

Characterization of a Pathogenic Escherichia coli Strain Derived from Oreochromis spp. Farms Using Whole-Genome Sequencing
Published on: December 23, 2022
Short genome report of cellulose-producing commensal Escherichia coli 1094
Joaquin Bernal-Bayard1, Laura Gomez-Valero2,3, Aimee Wessel1
11Département de Microbiologie, Unité de Génétique des Biofilms, Institut Pasteur, 25-28 rue du Dr. Roux, F-75015 Paris, France.
Abstract:
Bacterial surface colonization and biofilm formation often rely on the production of an extracellular polymeric matrix that mediates cell-cell and cell-surface contacts. In Escherichia coli and many Betaproteobacteria and Gammaproteobacteria cellulose is often the main component of the extracellular matrix. Here we report the complete genome sequence of the cellulose producing strain E. coli 1094 and compare it with five other closely related genomes within E. coli phylogenetic group A. We present a comparative analysis of the regions encoding genes responsible for cellulose biosynthesis and discuss the changes that could have led to the loss of this important adaptive advantage in several E. coli strains. Data deposition: The annotated genome sequence has been deposited at the European Nucleotide Archive under the accession number PRJEB21000.
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