Targetable BET proteins- and E2F1-dependent transcriptional program maintains the malignancy of glioblastoma

Liang Xu1, Ye Chen2, Anand Mayakonda2

  • 1Cancer Science Institute of Singapore, National University of Singapore, 117599 Singapore; csixl@nus.edu.sg.

Insights

Targeted degradation of BET proteins using dBET6 significantly inhibits glioblastoma (GBM) cell proliferation and self-renewal by impacting the E2F1 transcriptional program. This approach offers superior efficacy over traditional inhibitors and overcomes resistance in brain cancers.

Area of Science:

  • Oncology
  • Molecular Biology
  • Genetics

Background:

  • BET bromodomain inhibitors (BBIs) show preclinical promise against brain cancers by targeting BET proteins (BRD2, BRD3, BRD4, BRDT).
  • The precise transcriptional network driving glioblastoma (GBM) proliferation via BET proteins remains poorly understood.

Purpose of the Study:

  • To elucidate the role of BET proteins in GBM by investigating a novel chemical degrader, dBET6.
  • To reveal the BET protein-dependent transcriptional network, specifically the E2F1 program, in GBM.

Main Methods:

  • Mechanistic exploration of dBET6, a next-generation chemical degrader of BET proteins.
  • Assessment of dBET6's impact on BET protein genomic occupancy, RNA Polymerase II activity, and chromatin marks.
  • Evaluation of dBET6's effects on GBM cell proliferation, self-renewal, and tumorigenic potential.

Main Results:

  • dBET6 treatment significantly reduced BET protein occupancy, RNA-Pol2 activity, and permissive chromatin marks in GBM cells.
  • dBET6 repressed GBM cell proliferation, self-renewal, and tumorigenic capacity.
  • BET protein degradation via dBET6 demonstrated superior anti-proliferative effects and overcame resistance compared to conventional BBIs.

Conclusions:

  • BET proteins play a crucial role in regulating the E2F1 transcriptional program in both differentiated and initiating GBM cells.
  • Targeted degradation of BET proteins represents a promising therapeutic strategy for GBM, offering enhanced efficacy and overcoming resistance.
  • This study provides a strong rationale for developing BET protein degraders as a novel treatment for brain cancers.

Related Concept Videos

Transcription Elongation Factors02:35

Transcription Elongation Factors

Transcription elongation is a dynamic process that alters depending upon the sequence heterogeneity of the DNA being transcribed. Hence, it is not surprising that the elongation complex's composition also varies along the way while transcribing a gene.
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA...
14.1K
Transcription Factors02:16

Transcription Factors

Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
82.9K
Transcription01:10

Transcription

Overview
Transcription is the process of synthesizing RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in the proper synthesis of messenger RNA (mRNA). Regulation of transcription is responsible for the differentiation of all the different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds...
157.1K
Prokaryotic Transcriptional Activators and Repressors01:58

Prokaryotic Transcriptional Activators and Repressors

The organization of prokaryotic genes in their genome is notably different from that of eukaryotes. Prokaryotic genes are organized, such that the genes for proteins involved in the same biochemical process or function are located together in groups. This group of genes, along with their regulatory elements, are collectively known as an operon. The functional genes in an operon are transcribed together to give a single strand of mRNA known as polycistronic mRNA.
Transcription of prokaryotic...
25.6K
Eukaryotic Transcription Activators02:42

Eukaryotic Transcription Activators

Transcription activators are proteins that promote the transcription of genes from DNA to RNA. In most cases, these proteins contain two separate domains ‒ a domain that binds to DNA and a domain for activating transcription; however, in some cases, a single domain is responsible for both binding and activation of transcription, as seen in the glucocorticoid receptor and MyoD.
The binding domains are capable of recognizing and interacting with regulatory sequences on the DNA. These...
12.9K
Master Transcription Regulators02:23

Master Transcription Regulators

Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a  complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
7.8K