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Related Experiment Video

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A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports
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Disease Heritability Inferred from Familial Relationships Reported in Medical Records.

Fernanda C G Polubriaginof1, Rami Vanguri1, Kayla Quinnies2

  • 1Department of Biomedical Informatics, Columbia University, New York, NY, USA.

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|May 22, 2018
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Summary

Electronic health records (EHRs) can identify millions of familial relationships for genetic research. This study validates EHRs for calculating disease heritability, offering a scalable approach to understanding genetic disease causes.

Keywords:
data miningdisease heritabilityelectronic health recordfamilial relationshipsfamily historygeneticsobservational databases

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Area of Science:

  • Genetics
  • Bioinformatics
  • Epidemiology

Background:

  • Heritability studies are crucial for understanding disease etiology but traditionally require extensive patient data collection.
  • Electronic Health Records (EHRs) offer a vast, passively collected data resource for biomedical research.
  • Next-of-kin information within EHRs has been an underutilized research asset.

Purpose of the Study:

  • To investigate the utility of EHR-derived familial relationships for genetic heritability studies.
  • To assess the feasibility of using EHR data for calculating heritability estimates across numerous disease phenotypes.
  • To validate EHRs as a scalable resource for genetic and disease research.

Main Methods:

  • Mining emergency contact data from three academic medical centers to identify familial relationships.
  • Utilizing identified relationships to compute heritability estimates for 500 disease phenotypes.
  • Comparing EHR-derived heritability estimates with existing literature and across different sites.

Main Results:

  • Successfully identified 7.4 million familial relationships from EHRs while preserving patient privacy.
  • Familial relationships derived from EHRs demonstrated consistency with genetically inferred relatedness.
  • Heritability estimates for 500 disease phenotypes were largely consistent with prior research and between institutions.

Conclusions:

  • EHRs, particularly next-of-kin data, represent a valuable and scalable resource for genetic research.
  • The study validates the use of EHRs for calculating disease heritability, complementing traditional methods.
  • Findings highlight the potential of EHRs to advance our understanding of the genetic basis of diseases.