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Published on: September 13, 2022
Keystone taxa as drivers of microbiome structure and functioning.
Samiran Banerjee1, Klaus Schlaeppi2,3, Marcel G A van der Heijden4,5,6
1Department of Agroecology and Environment, Agroscope, Zurich, Switzerland. samiran.banerjee@agroscope.admin.ch.
Microbial keystone taxa are crucial for ecosystem function, regardless of their abundance. This article defines these key microbial groups and reviews over 200 examples across diverse environments.
Area of Science:
- Microbial Ecology
- Ecosystem Function
- Microbiome Research
Background:
- Microorganisms play a critical role in ecosystem functioning.
- Keystone taxa, critical microbial groups, influence community composition and function irrespective of abundance.
- Understanding these keystone taxa is vital for managing microbial communities.
Purpose of the Study:
- To propose a definition for keystone taxa in microbial ecology.
- To summarize identified microbial keystone taxa across various ecosystems.
- To explore the significance of keystone taxa and guilds in microbiome structure and function.
Main Methods:
- Literature review and synthesis of existing research on microbial keystone taxa.
- Identification and categorization of over 200 microbial keystone taxa.
- Analysis of factors influencing keystone taxa distribution and activity.
Main Results:
- A clear definition of microbial keystone taxa is proposed.
- Over 200 microbial keystone taxa have been identified in soil, plant, marine, and human microbiomes.
- Keystone taxa and guilds significantly impact microbiome structure and function.
Conclusions:
- Keystone taxa are essential drivers of microbial community dynamics and ecosystem processes.
- The proposed definition and summarized taxa provide a framework for future research.
- Understanding keystone taxa distribution and activity is key to microbiome engineering and management.
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