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Published on: May 2, 2019
A stress-induced response complex (SIRC) shuttles miRNAs, siRNAs, and oligonucleotides to the nucleus
Daniela Castanotto1, Xiaowei Zhang2, Jessica Alluin3
1Department of Medical Oncology, City of Hope, Duarte, CA 91010; dcastanotto@coh.org cstein@coh.org.
Abstract:
Although some information is available for specific subsets of miRNAs and several factors have been shown to bind oligonucleotides (ONs), no general transport mechanism for these molecules has been identified to date. In this work, we demonstrate that the nuclear transport of ONs, siRNAs, and miRNAs responds to cellular stress. Furthermore, we have identified a stress-induced response complex (SIRC), which includes Ago-1 and Ago-2 in addition to the transcription and splicing regulators YB1, CTCF, FUS, Smad1, Smad3, and Smad4. The SIRC transports endogenous miRNAs, siRNAs, and ONs to the nucleus. We show that cellular stress can significantly increase ON- or siRNA-directed splicing switch events and endogenous miRNA targeting of nuclear RNAs.
Insights
Cellular stress triggers a novel transport mechanism for nucleic acids. A stress-induced response complex (SIRC) containing Ago proteins and regulatory factors moves oligonucleotides, siRNAs, and miRNAs into the nucleus.
Area of Science:
- Molecular Biology
- Cell Biology
- RNA Biology
Background:
- Limited understanding of general nuclear transport mechanisms for nucleic acids like oligonucleotides (ONs), siRNAs, and miRNAs.
- Prior studies identified factors binding specific nucleic acid subsets, but a universal transport pathway remained elusive.
Purpose of the Study:
- To investigate the nuclear transport of ONs, siRNAs, and miRNAs.
- To identify the molecular machinery and conditions regulating this transport.
Main Methods:
- Induction of cellular stress.
- Biochemical analysis to identify protein complexes involved in nuclear transport.
- Assessment of nucleic acid (miRNA, siRNA, ON) localization and function within the nucleus under stress conditions.
Main Results:
- Nuclear transport of ONs, siRNAs, and miRNAs is responsive to cellular stress.
- Identification of a novel stress-induced response complex (SIRC) comprising Ago-1, Ago-2, YB1, CTCF, FUS, Smad1, Smad3, and Smad4.
- SIRC facilitates the nuclear import of endogenous miRNAs, siRNAs, and ONs.
Conclusions:
- Cellular stress activates a specific pathway for nuclear import of various nucleic acid types.
- The SIRC complex is a key mediator of this stress-induced nuclear transport.
- This mechanism enhances the efficiency of ON/siRNA-mediated splicing modulation and nuclear RNA targeting by endogenous miRNAs.
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