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Published on: April 30, 2018
Inferring diameters of spheres and cylinders using interstitial water
Sheryl L Herrera1, Morgan E Mercredi2, Richard Buist3
1Physics and Astronomy, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada. umherres@myumanitoba.ca.
Object:
Most early methods to infer axon diameter distributions using magnetic resonance imaging (MRI) used single diffusion encoding sequences such as pulsed gradient spin echo (SE) and are thus sensitive to axons of diameters > 5 μm. We previously simulated oscillating gradient (OG) SE sequences for diffusion spectroscopy to study smaller axons including the majority constituting cortical connections. That study suggested the model of constant extra-axonal diffusion breaks down at OG accessible frequencies. In this study we present data from phantoms to test a time-varying interstitial apparent diffusion coefficient.
Materials And Methods:
Diffusion spectra were measured in four samples from water packed around beads of diameters 3, 6 and 10 μm; and 151 μm diameter tubes. Surface-to-volume ratios, and diameters were inferred.
Results:
The bead pore radii estimates were 0.60±0.08 μm, 0.54±0.06 μm and 1.0±0.1 μm corresponding to bead diameters ranging from 2.9±0.4 μm to 5.3±0.7 μm, 2.6±0.3 μm to 4.8±0.6 μm, and 4.9±0.7 μm to 9±1 μm. The tube surface-to-volume ratio estimate was 0.06±0.02 μm-1 corresponding to a tube diameter of 180±70 μm.
Conclusion:
Interstitial models with OG inferred 3-10 μm bead diameters from 0.54±0.06 μm to 1.0±0.1 μm pore radii and 151 μm tube diameters from 0.06±0.02 μm-1 surface-to-volume ratios.
Insights
Oscillating gradient (OG) magnetic resonance imaging (MRI) successfully inferred small axon diameters (3-10 μm) and tube sizes. This diffusion spectroscopy method advances understanding of brain connectivity.
Area of Science:
- Neuroimaging
- Biophysics
- Diffusion MRI
Background:
- Early magnetic resonance imaging (MRI) methods for axon diameter distribution inference were limited to larger axons (> 5 μm).
- Oscillating gradient (OG) sequences offer potential for studying smaller axons, crucial for cortical connections.
- Previous simulations suggested a breakdown of constant extra-axonal diffusion models at OG frequencies.
Purpose of the Study:
- To experimentally validate the use of OG sequences for inferring axon diameter distributions.
- To test a time-varying interstitial apparent diffusion coefficient model.
- To assess the accuracy of OG diffusion spectroscopy in phantoms.
Main Methods:
- Diffusion spectra were acquired using OG sequences in phantoms containing water-filled beads (3, 6, 10 μm) and tubes (151 μm).
- Bead diameters and tube surface-to-volume ratios were measured.
- Interstitial models were applied to infer structural parameters.
Main Results:
- Inferred bead pore radii ranged from 0.54±0.06 μm to 1.0±0.1 μm, corresponding to bead diameters of 2.6±0.3 μm to 9±1 μm.
- The estimated surface-to-volume ratio for the tubes was 0.06±0.02 μm-1, indicating a diameter of 180±70 μm.
- The OG diffusion spectroscopy accurately estimated the dimensions of the phantoms.
Conclusions:
- Interstitial models utilizing OG successfully inferred bead diameters (3-10 μm) and tube diameters (151 μm).
- The findings support the utility of OG diffusion spectroscopy for characterizing small axonal structures.
- This technique holds promise for advancing the study of brain microstructure and connectivity.
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