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Updated: Aug 21, 2026

Isolation and Genome Analysis of Single Virions using 'Single Virus Genomics'
Published on: May 26, 2013
Physical characterization of the genome of the Myxococcus xanthus bacteriophage MX-8
Abstract:
We have constructed a restriction map for the genome of bacteriophage MX-8 from Myxococcus xanthus using the enzymes PvuII, MboI, and EcoRI. The phage genome size, as determined by restriction analysis, is 51.7 +/- 0.6 Kb. Double digestions, redigestions of isolated fragments, and crossed-contact hybridization of partial digestion products show that the restriction map is circular. Restriction analysis and Southern hybridization show that the phage DNA molecules are packaged sequentially from a concatemer starting from a specific site which we have mapped. The DNA molecules have an average terminal redundancy of approximately 8% and are circularly permuted over at least 40% of the genome.
Insights
Researchers mapped the Myxococcus xanthus bacteriophage MX-8 genome, revealing a circular DNA structure of 51.7 Kb. The phage DNA is packaged sequentially with terminal redundancy and circular permutation.
Area of Science:
- Molecular Biology
- Virology
- Genomics
Background:
- Bacteriophage MX-8 is a virus that infects Myxococcus xanthus.
- Understanding phage genome structure is crucial for viral replication and evolution studies.
Purpose of the Study:
- To construct a detailed restriction map of the bacteriophage MX-8 genome.
- To determine the genome size, structure, and packaging mechanism of bacteriophage MX-8.
Main Methods:
- Restriction enzyme digestion (PvuII, MboI, EcoRI) of phage DNA.
- Double digestions, fragment redigestion, and crossed-contact hybridization.
- Southern hybridization techniques to analyze DNA packaging.
Main Results:
- Determined bacteriophage MX-8 genome size to be 51.7 +/- 0.6 Kb.
- Established a circular restriction map for the phage genome.
- Demonstrated sequential DNA packaging from a concatemer with a specific start site, average 8% terminal redundancy, and ~40% circular permutation.
Conclusions:
- The bacteriophage MX-8 genome is circular and packaged in a specific, non-random manner.
- Terminal redundancy and circular permutation are key features of bacteriophage MX-8 DNA packaging.
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