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Updated: Feb 9, 2026

Detection of Protein Aggregation using Fluorescence Correlation Spectroscopy
Published on: April 25, 2021
Modulation of Fluorescent Protein Chromophores To Detect Protein Aggregation with Turn-On Fluorescence
Yu Liu, Charles H Wolstenholme, Gregory C Carter
1Department of Chemistry , University of Washington , Seattle , Washington 98105 , United States.
Abstract:
We present a fluorogenic method to visualize misfolding and aggregation of a specific protein-of-interest in live cells using structurally modulated fluorescent protein chromophores. Combining photophysical analysis, X-ray crystallography, and theoretical calculation, we show that fluorescence is triggered by inhibition of twisted-intramolecular charge transfer of these fluorophores in the rigid microenvironment of viscous solvent or protein aggregates. Bioorthogonal conjugation of the fluorophore to Halo-tag fused protein-of-interests allows for fluorogenic detection of both misfolded and aggregated species in live cells. Unlike other methods, our method is capable of detecting previously invisible misfolded soluble proteins. This work provides the first application of fluorescent protein chromophores to detect protein conformational collapse in live cells.
Insights
We developed a new fluorescent method to visualize misfolded proteins in live cells. This technique detects previously invisible misfolded soluble proteins, offering new insights into protein aggregation and cellular health.
Area of Science:
- Biochemistry
- Cell Biology
- Biophysics
Background:
- Protein misfolding and aggregation are implicated in various diseases.
- Current methods struggle to detect soluble misfolded proteins in live cells.
Purpose of the Study:
- To develop a novel fluorogenic method for visualizing specific protein misfolding and aggregation in live cells.
- To enable the detection of previously undetectable misfolded soluble proteins.
Main Methods:
- Utilized structurally modulated fluorescent protein chromophores.
- Combined photophysical analysis, X-ray crystallography, and theoretical calculations.
- Employed bioorthogonal conjugation of fluorophores to Halo-tag fused proteins.
Main Results:
- Demonstrated that fluorescence is triggered by the inhibition of twisted-intramolecular charge transfer in rigid environments.
- Successfully visualized both misfolded and aggregated protein species in live cells.
- Showcased the ability to detect previously invisible misfolded soluble proteins.
Conclusions:
- The developed fluorogenic method provides a powerful tool for studying protein conformational changes in real-time.
- This approach offers unprecedented sensitivity for detecting misfolded proteins, advancing our understanding of proteinopathies.
- Represents the first application of fluorescent protein chromophores for detecting protein conformational collapse in live cellular systems.
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