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Published on: September 7, 2018
Deep sequencing identification of miRNAs in pigeon ovaries illuminated with monochromatic light
Ying Wang1, Hai-Ming Yang2, Wei Cao1
1College of Animal Science and Technology, Yangzhou University, Yangzhou, Jiangsu Province, 225009, People's Republic of China.
Background:
The use of light of different wavelengths has grown popular in the poultry industry. An optimum wavelength is believed to improve pigeon egg production, but little is known about the role of microRNAs (miRNAs) in the effects of monochromatic light on ovarian pigeon function. Herein, we harvested ovaries from pigeons reared under monochromatic light of different wavelength and performed deep sequencing on various tissues using an Illumina Solexa high-throughput instrument.
Results:
We obtained 66,148,548, 67,873,805, and 71,661,771 clean reads from ovaries of pigeons reared under red light (RL), blue light (BL), and white light (WL), respectively. We identified 1917 known miRNAs in nine libraries, of which 524 were novel. Three and five differentially expressed miRNAs were identified in BL vs. WL and RL vs. WL groups, respectively. Quantitative reverse transcription PCR was used to validate differentially expressed miRNAs (miR-200, miR-122, and miR-205b). In addition, 5824 target genes were annotated as differentially expressed miRNAs, most of which are involved in reproductive pathways including oestrogen signalling, cell cycle, and oocyte maturation. Notably, ovarian miR-205b expression was significantly negatively correlated with its target 11β-hydroxysteroid dehydrogenase type 1 (HSD11B1).
Conclusions:
miRNA-mRNA network analysis suggests that miR-205b targeting of HSD11B1 plays a key role in the effects of monochromatic light on pigeon egg production. These findings indicate that monochromatic light shortens the oviposition interval of pigeons, which may be useful for egg production and pigeon breeding.
Insights
Monochromatic light impacts pigeon egg production by altering microRNA (miRNA) expression in ovaries. Specifically, miR-205b targeting HSD11B1 is key, potentially shortening the oviposition interval for improved poultry breeding.
Area of Science:
- Poultry Science
- Molecular Biology
- Reproductive Biology
Background:
- The poultry industry increasingly uses specific light wavelengths to enhance egg production.
- The role of microRNAs (miRNAs) in how monochromatic light affects pigeon ovarian function remains largely unexplored.
- This study investigates the impact of different light wavelengths on ovarian miRNA expression in pigeons.
Purpose of the Study:
- To identify microRNAs (miRNAs) involved in the ovarian response of pigeons to monochromatic light.
- To elucidate the molecular mechanisms by which light wavelengths influence pigeon reproductive performance.
- To explore the potential of light manipulation for improving egg production in pigeons.
Main Methods:
- Deep sequencing of ovarian tissues from pigeons exposed to red, blue, and white light.
- Identification and validation of differentially expressed microRNAs (miRNAs) using quantitative reverse transcription PCR.
- Analysis of miRNA-mRNA interactions and their involvement in reproductive pathways.
Main Results:
- High-throughput sequencing yielded millions of clean reads, revealing numerous known and novel miRNAs.
- Significant differences in miRNA expression were observed between pigeons exposed to blue light versus white light, and red light versus white light.
- Ovarian miR-205b expression was inversely correlated with its target gene, HSD11B1, suggesting a regulatory role.
Conclusions:
- MicroRNA-mRNA network analysis highlights the critical role of miR-205b targeting HSD11B1 in mediating the effects of monochromatic light on pigeon egg production.
- Monochromatic light exposure appears to shorten the oviposition interval in pigeons.
- These findings offer insights into optimizing light conditions for enhanced egg production and breeding in pigeons.
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