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Published on: November 29, 2016
Encoding Growth Factor Identity in the Temporal Dynamics of FOXO3 under the Combinatorial Control of ERK and AKT
Somponnat Sampattavanich1, Bernhard Steiert2, Bernhard A Kramer3
1HMS LINCS Center and Laboratory of Systems Pharmacology, Department of Systems Biology, Harvard Medical School, WAB Room 438, 200 Longwood Avenue, Boston, MA 02115, USA; Siriraj Laboratory for Systems Pharmacology, Department of Pharmacology, Faculty of Medicine Siriraj Hospital, Mahidol University, 12th Floor Srisavarindhira Building, 2 Wanglang Road, Bangkoknoi, Bangkok 10700, Thailand.
Abstract:
Extracellular growth factors signal to transcription factors via a limited number of cytoplasmic kinase cascades. It remains unclear how such cascades encode ligand identities and concentrations. In this paper, we use live-cell imaging and statistical modeling to study FOXO3, a transcription factor regulating diverse aspects of cellular physiology that is under combinatorial control. We show that FOXO3 nuclear-to-cytosolic translocation has two temporally distinct phases varying in magnitude with growth factor identity and cell type. These phases comprise synchronous translocation soon after ligand addition followed by an extended back-and-forth shuttling; this shuttling is pulsatile and does not have a characteristic frequency, unlike a simple oscillator. Early and late dynamics are differentially regulated by Akt and ERK and have low mutual information, potentially allowing the two phases to encode different information. In cancer cells in which ERK and Akt are dysregulated by oncogenic mutation, the diversity of states is lower.
Insights
This study reveals that the transcription factor FOXO3 exhibits distinct translocation phases in response to growth factors. These phases, regulated by Akt and ERK, encode different cellular signals, with altered dynamics in cancer cells.
Area of Science:
- Cellular signaling pathways
- Molecular biology
- Systems biology
Background:
- Extracellular growth factors transmit signals to transcription factors through cytoplasmic kinase cascades.
- The mechanisms by which these cascades encode specific ligand identities and concentrations remain incompletely understood.
- FOXO3 is a crucial transcription factor involved in various cellular processes, subject to complex regulatory control.
Purpose of the Study:
- To investigate the dynamic behavior of the transcription factor FOXO3 in response to extracellular signals.
- To elucidate how different growth factor signals are encoded by FOXO3 translocation dynamics.
- To explore the differential regulation of FOXO3 dynamics by key kinases Akt and ERK.
Main Methods:
- Live-cell imaging techniques to visualize FOXO3 localization in real-time.
- Statistical modeling to analyze the temporal dynamics of FOXO3 nuclear-to-cytosolic translocation.
- Perturbation experiments to assess the roles of Akt and ERK in regulating FOXO3 dynamics.
Main Results:
- FOXO3 translocation occurs in two distinct temporal phases: an initial synchronous translocation and a subsequent extended shuttling.
- The magnitude and dynamics of these phases vary with growth factor identity and cell type.
- Akt and ERK differentially regulate the early and late phases of FOXO3 translocation, exhibiting low mutual information between phases.
- Cancer cells with dysregulated Akt and ERK show reduced diversity in FOXO3 dynamic states.
Conclusions:
- FOXO3 translocation dynamics provide a mechanism for encoding distinct information about extracellular signals.
- The differential regulation of translocation phases by Akt and ERK allows for complex signal processing.
- Aberrant kinase signaling in cancer cells impairs the ability of FOXO3 to generate diverse dynamic responses.
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