CRISPR/Cas9 system in Plasmodium falciparum using the centromere plasmid

Tongchai Payungwoung1, Naoaki Shinzawa2, Akina Hino2

  • 1Department of Medical Zoology, Mie University School of Medicine, Tsu 514-0001, Mie, Japan.

Insights

We developed a novel transgenic parasite, PfCAS9, to improve CRISPR/Cas9 gene editing in Plasmodium falciparum. This method achieves nearly 100% modification efficiency for malaria parasite genetic studies.

Area of Science:

  • Molecular Biology
  • Parasitology
  • Genetics

Background:

  • CRISPR/Cas9 is a key tool for genetic modification of Plasmodium falciparum.
  • Current methods using co-transfection of two plasmids show low modification efficiency due to low plasmid frequency.
  • Improving gene editing efficiency is crucial for understanding malaria parasite biology.

Purpose of the Study:

  • To develop an improved CRISPR/Cas9 system for efficient genetic modification of Plasmodium falciparum.
  • To establish a transgenic parasite line, PfCAS9, for stable Cas9 nuclease expression.
  • To assess the efficiency of the PfCAS9 system in targeted gene mutagenesis.

Main Methods:

  • Development of a transgenic PfCAS9 parasite line expressing Cas9 nuclease via a centromere plasmid.
  • Site-directed mutagenesis of the kelch13 gene, associated with artemisinin resistance.
  • Co-transfection of the PfCAS9 parasite with a plasmid encoding sgRNA and donor template DNA.
  • Treatment with drugs to maintain both centromere and sgRNA plasmids.

Main Results:

  • The PfCAS9 parasite line stably expresses Cas9 nuclease.
  • Targeted mutation of the kelch13 gene was achieved with nearly 100% efficiency.
  • Drug treatment ensured the maintenance of both essential plasmids for high efficiency.

Conclusions:

  • The novel PfCAS9 transgenic parasite line significantly enhances CRISPR/Cas9 gene editing efficiency in Plasmodium falciparum.
  • This improved system facilitates precise genetic modification for malaria research.
  • PfCAS9 offers a valuable tool for studying drug resistance and parasite biology.

Related Concept Videos

CRISPR01:59

CRISPR

Genome editing technologies allow scientists to modify an organism’s DNA via the addition, removal, or rearrangement of genetic material at specific genomic locations. These types of techniques could potentially be used to cure genetic disorders such as hemophilia and sickle cell anemia. One popular and widely used DNA-editing research tool that could lead to safe and effective cures for genetic disorders is the CRISPR-Cas9 system. CRISPR-Cas9 stands for Clustered Regularly Interspaced...
58.0K
Histone Variants at the Centromere02:30

Histone Variants at the Centromere

Histone variants are the histone proteins with structural and sequence variations. These variants may be regarded as “mutant” forms that replace their canonical histone counterparts in the nucleosomes. Specific post-translational modifications on the histone variants enable further chromatin complexity and regulate tissue-specific gene expression. The most common histone variants are from histone H2A, H2B, and linker histone H1 families. However, several variants of histone H3...
5.1K
CRISPR/Cas9 Genome Editing01:28

CRISPR/Cas9 Genome Editing

The CRISPR-Cas system serves as a bacterial defense mechanism against invading genetic elements such as viruses and plasmids, forming the foundation for its adaptation as a powerful genome-editing tool. Originally discovered in prokaryotes, this system has been repurposed to revolutionize genetic engineering across a wide range of organisms, including plants, animals, and humans. The core component, Cas9, is an endonuclease derived from Streptococcus pyogenes, capable of introducing...
1.9K
CRISPR and crRNAs02:53

CRISPR and crRNAs

Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
19.2K
Plasmids01:28

Plasmids

Plasmids are extrachromosomal DNA molecules found in bacteria, archaea, and some eukaryotic microbes like yeast. These small, circular DNA structures typically contain fewer than 30 genes, although some may exist linearly. Plasmids vary in their number within a cell, known as copy number. Single-copy plasmids are present in one copy per cell and multi-copy plasmids are present in multiple copies, reaching over 100 copies per cell.Plasmids usually replicate independently of the chromosomal DNA...
2.6K
The Antiviral System of Bacteria and Archaea: CRISPR01:23

The Antiviral System of Bacteria and Archaea: CRISPR

CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats is a adaptive immune system found in bacteria and archaea that protects against viral infections. This system enables prokaryotic cells to identify, remember, and neutralize foreign genetic elements, primarily bacteriophages, by storing fragments of the invader’s DNA as a genetic memory.The CRISPR immune response begins during an initial infection. Cas (CRISPR-associated) proteins play a central role in this...
724