Related Experiment Video
Updated: Feb 9, 2026

Author Spotlight: Establishing CENP-E Knockout HeLa Cells – A Novel Approach to Study Kinesin-7 CENP-E Biology and its Inhibitors
Published on: June 23, 2023
CRISPR/Cas9 system in Plasmodium falciparum using the centromere plasmid
Tongchai Payungwoung1, Naoaki Shinzawa2, Akina Hino2
1Department of Medical Zoology, Mie University School of Medicine, Tsu 514-0001, Mie, Japan.
Abstract:
The CRISPR/Cas9 nuclease system is a powerful method to genetically modify the human malarial parasite, Plasmodium falciparum. Currently, this method is carried out by co-transfection with two plasmids, one containing the Cas9 nuclease gene, and another encoding the sgRNA and the donor template DNA. However, the efficiency of modification is currently low owing to the low frequency of these plasmids in the parasites. To improve the CRISPR/Cas9 nuclease system for P. falciparum, we developed a novel method using the transgenic parasite, PfCAS9, which stably expresses the Cas9 nuclease using the centromere plasmid. To examine the efficiency of genetic modification using the PfCAS9 parasite, we performed site-directed mutagenesis of kelch13 gene, which is considered to be involved in artemisinin resistance. Our results demonstrated that the targeted mutation could be introduced with almost 100% efficiency when the transfected PfCAS9 parasites were treated with two drugs to maintain both the centromere plasmid containing the Cas9 nuclease and the plasmid having the sgRNA. Therefore, the PfCAS9 parasite is a useful parasite line for the genetic modification of P. falciparum.
Insights
We developed a novel transgenic parasite, PfCAS9, to improve CRISPR/Cas9 gene editing in Plasmodium falciparum. This method achieves nearly 100% modification efficiency for malaria parasite genetic studies.
Area of Science:
- Molecular Biology
- Parasitology
- Genetics
Background:
- CRISPR/Cas9 is a key tool for genetic modification of Plasmodium falciparum.
- Current methods using co-transfection of two plasmids show low modification efficiency due to low plasmid frequency.
- Improving gene editing efficiency is crucial for understanding malaria parasite biology.
Purpose of the Study:
- To develop an improved CRISPR/Cas9 system for efficient genetic modification of Plasmodium falciparum.
- To establish a transgenic parasite line, PfCAS9, for stable Cas9 nuclease expression.
- To assess the efficiency of the PfCAS9 system in targeted gene mutagenesis.
Main Methods:
- Development of a transgenic PfCAS9 parasite line expressing Cas9 nuclease via a centromere plasmid.
- Site-directed mutagenesis of the kelch13 gene, associated with artemisinin resistance.
- Co-transfection of the PfCAS9 parasite with a plasmid encoding sgRNA and donor template DNA.
- Treatment with drugs to maintain both centromere and sgRNA plasmids.
Main Results:
- The PfCAS9 parasite line stably expresses Cas9 nuclease.
- Targeted mutation of the kelch13 gene was achieved with nearly 100% efficiency.
- Drug treatment ensured the maintenance of both essential plasmids for high efficiency.
Conclusions:
- The novel PfCAS9 transgenic parasite line significantly enhances CRISPR/Cas9 gene editing efficiency in Plasmodium falciparum.
- This improved system facilitates precise genetic modification for malaria research.
- PfCAS9 offers a valuable tool for studying drug resistance and parasite biology.
Related Concept Videos
CRISPR
Histone Variants at the Centromere
CRISPR/Cas9 Genome Editing
CRISPR and crRNAs
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
Plasmids
The Antiviral System of Bacteria and Archaea: CRISPR

