SKP2- and OTUD1-regulated non-proteolytic ubiquitination of YAP promotes YAP nuclear localization and activity

Fan Yao1, Zhicheng Zhou1, Jongchan Kim1

  • 1Department of Experimental Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA.

Nature Communications
|June 13, 2018
PubMed

Insights

YAP protein

Area of Science:

  • Cell Biology
  • Molecular Biology
  • Biochemistry

Background:

  • Dysregulated YAP localization and activity are linked to cancer.
  • The Hippo pathway controls YAP, but independent regulation exists.

Purpose of the Study:

  • To investigate the role of ubiquitination in YAP regulation independent of the Hippo pathway.
  • To identify the specific E3 ligase and deubiquitinase involved in YAP ubiquitination.

Main Methods:

  • Investigated YAP ubiquitination using SCFSKP2 E3 ligase and OTUD1 deubiquitinase.
  • Utilized site-directed mutagenesis to alter YAP ubiquitination sites (K321, K497).
  • Assessed YAP localization, TEAD interaction, and transcriptional activity through genetic manipulation and biochemical assays.

Main Results:

  • YAP undergoes K63-linked polyubiquitination by SCFSKP2, promoting nuclear localization and activity.
  • OTUD1 reverses this ubiquitination, inhibiting YAP.
  • Mutating YAP's ubiquitination sites or altering SKP2/OTUD1 levels impacts YAP's cytoplasmic retention and activity, independent of Hippo signaling.

Conclusions:

  • Ubiquitination, mediated by SCFSKP2 and OTUD1, represents a novel Hippo-independent mechanism for YAP regulation.
  • Targeting this ubiquitination pathway could offer new therapeutic strategies for YAP-driven pathologies like cancer.

Related Concept Videos

Regulated Protein Degradation02:58

Regulated Protein Degradation

It is vital to regulate the activity of enzymatic as well as non-enzymatic proteins inside the cell. This can be achieved either through creating a balance between their rate of synthesis and degradation or regulating the intrinsic activity of the protein. Both these regulation mechanisms play an essential role in the normal functioning of cells.
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
8.9K
Nuclear Localization Signals and Import01:46

Nuclear Localization Signals and Import

Proteins targeted to the nucleus carry short stretches of amino acid sequences called the nuclear localization signal or NLS. Classical nuclear localization signals are of two types: monopartite and bipartite NLS. Monopartite classical NLS (cNLS) consists of a single cluster of 4-8 amino acids. Bipartite cNLS consists of two clusters of  2-3 amino acids and a 9-12 residue long proline-rich linker bridging the two clusters. Signal clusters are rich in positively charged amino acids such as...
7.8K
Regulation of Nuclear Protein Sorting01:45

Regulation of Nuclear Protein Sorting

Nuclear protein sorting regulates nucleus composition and gene expression, crucial for determining the fate of a eukaryotic cell. Hence, the entry and exit of molecules across the nuclear envelope is a tightly controlled process. Nuclear protein sorting can be inhibited by one of the following ways: 1) masking cargo signal sequences, 2) modifying the nuclear receptor's affinity for cargo, 3) controlling the nuclear pore size, 4) retaining the cargo during its transit to the cytosol or the...
3.4K
Covalently Linked Protein Regulators02:04

Covalently Linked Protein Regulators

Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein....
9.7K
Regulation of Expression Occurs at Multiple Steps02:24

Regulation of Expression Occurs at Multiple Steps

Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
26.5K
The Eukaryotic Promoter Region02:40

The Eukaryotic Promoter Region

The eukaryotic promoter region is a segment of DNA located upstream of a gene. It contains an RNA polymerase binding site, a transcription start site, and several cis-regulatory sequences.  The proximal promoter region is located in the vicinity of the gene and has cis-regulatory sequences and the core promoter. The core promoter is the binding site for RNA polymerase and is usually located between -35 and +35 nucleotides from the transcription start site. The distal promoter regions are...
18.9K