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Examining Proteasome Assembly with Recombinant Archaeal Proteasomes and Nondenaturing PAGE: The Case for a Combined Approach
Published on: December 17, 2016
Small Molecule Modulation of Proteasome Assembly
Evert Njomen1, Pawel A Osmulski2, Corey L Jones1
1Department of Chemistry , Michigan State University , East Lansing , Michigan 48824 , United States.
Abstract:
The 20S proteasome is the main protease that directly targets intrinsically disordered proteins (IDPs) for proteolytic degradation. Mutations, oxidative stress, or aging can induce the buildup of IDPs resulting in incorrect signaling or aggregation, associated with the pathogenesis of many cancers and neurodegenerative diseases. Drugs that facilitate 20S-mediated proteolysis therefore have many potential therapeutic applications. We report herein the modulation of proteasome assembly by the small molecule TCH-165, resulting in an increase in 20S levels. The increase in the level of free 20S corresponds to enhanced proteolysis of IDPs, including α-synuclein, tau, ornithine decarboxylase, and c-Fos, but not structured proteins. Clearance of ubiquitinated protein was largely maintained by single capped proteasome complexes (19S-20S), but accumulation occurs when all 19S capped proteasome complexes are depleted. This study illustrates the first example of a small molecule capable of targeting disordered proteins for degradation by regulating the dynamic equilibrium between different proteasome complexes.
Insights
A novel small molecule, TCH-165, enhances proteasome activity to degrade disease-linked intrinsically disordered proteins (IDPs). This discovery offers new therapeutic avenues for neurodegenerative diseases and cancers by targeting protein aggregation.
Area of Science:
- Biochemistry
- Molecular Biology
- Proteostasis
Background:
- The 20S proteasome is crucial for degrading intrinsically disordered proteins (IDPs).
- Accumulation of IDPs, due to mutations, stress, or aging, is linked to cancer and neurodegenerative diseases.
- Targeting 20S-mediated proteolysis presents therapeutic opportunities.
Purpose of the Study:
- To investigate the effect of the small molecule TCH-165 on proteasome assembly and function.
- To determine if TCH-165 can enhance the degradation of disease-associated IDPs.
- To explore the mechanism by which TCH-165 modulates proteasome complexes.
Main Methods:
- Treatment with the small molecule TCH-165.
- Analysis of proteasome complex levels and assembly.
- Assessment of proteolysis rates for various proteins, including IDPs and structured proteins.
- Evaluation of ubiquitinated protein clearance under different proteasome capping conditions.
Main Results:
- TCH-165 treatment increased the levels of the free 20S proteasome core particle.
- Enhanced proteolysis of IDPs such as alpha-synuclein, tau, ornithine decarboxylase, and c-Fos was observed.
- Degradation of structured proteins remained unaffected.
- Ubiquitinated protein clearance was maintained by singly capped proteasomes but impaired upon complete 19S cap depletion.
Conclusions:
- TCH-165 modulates proteasome assembly, increasing free 20S levels and enhancing IDP degradation.
- This represents the first small molecule shown to target disordered proteins for degradation by regulating proteasome complex dynamics.
- The findings suggest TCH-165 as a potential therapeutic agent for diseases characterized by IDP accumulation.
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