Related Experiment Video
Updated: Feb 9, 2026

07:44
Identifying Protein-protein Interaction Sites Using Peptide Arrays
Published on: November 18, 2014
18.6K
Blocking the interaction between S100A9 protein and RAGE V domain using S100A12 protein
1Department of Chemistry, National Tsing Hua University, Hsinchu, Taiwan.
Plos One
|June 15, 2018
Summary
The S100A12 protein inhibits S100A9 from binding to the RAGE V-domain. This discovery suggests S100A12 could be an antagonist for S100A9, potentially aiding in anti-cancer drug development.
Area of Science:
- Biochemistry
- Molecular Biology
- Structural Biology
Background:
- S100A9 and S100A12 are calcium-binding proteins involved in cellular processes.
- The V domain of Receptor for Advanced Glycation End products (RAGE) is critical for S100A9 binding, influencing cell proliferation.
Purpose of the Study:
- To investigate the interaction between S100A9 and S100A12.
- To determine if S100A12 affects the binding of S100A9 to the RAGE V-domain.
Main Methods:
- Fluorescence spectroscopy and Nuclear Magnetic Resonance (NMR) spectroscopy were employed to analyze S100A9-S100A12 interactions.
- Binary complex models were generated using 1H-15N HSQC NMR titrations and the HADDOCK program.
Main Results:
- S100A12 was shown to hinder the binding of S100A9 to the RAGE V-domain.
- Structural modeling confirmed that S100A12 physically blocks the S100A9-RAGE V-domain interaction site.
Conclusions:
- S100A12 acts as an antagonist to S100A9 by preventing its interaction with RAGE.
- These findings offer potential for developing novel anti-cancer therapeutics targeting the S100 protein family.
Related Concept Videos
Conservation of Protein Domains Over Different Proteins
14.6K
Protein domains are small structurally independent units that are part of a single amino acid chain. Although these domains are often structurally independent, they may rely on synergistic effects to perform their functions as part of a larger protein. Protein domains may be conserved within the same organism, as well as across different organisms.
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to...
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to...
14.6K
Conservation of Protein Domains
4.1K
4.1K
Protein-protein Interfaces
14.8K
Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a...
14.8K
RNA Polymerase II Accessory Proteins
11.0K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
11.0K
Protein and Protein Structure
88.2K
Proteins are one of the most abundant organic molecules in living systems and have the most diverse range of functions of all macromolecules. Proteins may be structural, regulatory, contractile, or protective. They may serve in transport, storage, or membranes; or they may be toxins or enzymes. Their structures, like their functions, vary greatly. They are all, however, amino acid polymers arranged in a linear sequence.
A protein's shape is critical to its function. For example, an enzyme...
A protein's shape is critical to its function. For example, an enzyme...
88.2K
What are Proteins?
240.0K
Overview
240.0K

