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GPU-based deep convolutional neural network for tomographic phase microscopy with ℓ1 fitting and regularization.

Hui Qiao1, Jiamin Wu1, Xiaoxu Li1

  • 1Tsinghua University, Department of Automation, Beijing, China.

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|June 16, 2018
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Summary

This study introduces a deep learning approach using graphics processing unit-accelerated convolutional neural networks to enhance tomographic phase microscopy (TPM) imaging. The method significantly improves 3D refractive index mapping with fewer incident angles, enabling dynamic scene analysis.

Keywords:
GPU-based implementationneural networkrefractive indextomographic phase microscopyℓ1 data-fidelity

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Area of Science:

  • Biomedical Imaging
  • Computational Microscopy
  • Optical Physics

Background:

  • Tomographic phase microscopy (TPM) enables 3D refractive index mapping of transparent samples.
  • Conventional TPM requires dense angular sampling, limiting temporal resolution and dynamic scene analysis.

Purpose of the Study:

  • To develop a graphics processing unit (GPU)-accelerated deep learning method for enhanced TPM.
  • To improve TPM performance with significantly reduced angular sampling.

Main Methods:

  • Implemented a deep convolutional neural network (CNN) on a GPU for phase tomography.
  • Utilized an ℓ1-norm sparsity constraint as a loss function for data fidelity and gradient-domain regularization.
  • Employed a multislice beam propagation model.

Main Results:

  • Achieved at least 14 dB improvement in signal-to-noise ratio compared to state-of-the-art algorithms.
  • Demonstrated successful imaging of HeLa cells with substantial data reduction.
  • Validated the effectiveness of the deep learning approach with fewer incident angles.

Conclusions:

  • The proposed GPU-accelerated deep learning method significantly enhances TPM performance.
  • Reduced angular sampling is feasible for accurate 3D refractive index distribution measurement.
  • This advancement broadens the applicability of TPM for dynamic biological imaging.