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Author Spotlight: Advancing Rapid Detection of Respiratory Pathogens Using Microfluidic Chip
Published on: March 29, 2024
Rapid detection of Mycoplasma pneumoniae by loop-mediated isothermal amplification assay
Xin Yuan1, Changqing Bai, Qian Cui
1Department of Respiratory and Critical Care Medicine, 307th Hospital of Chinese People's Liberation Army Institute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing City, China.
Abstract:
To improve the diagnosis and treatment of Mycoplasma pneumoniae (Mp) infection and reduce the misuse of antibiotics, we sought to establish a loop-mediated isothermal amplification (LAMP) assay for rapid detection of Mp.Six primers specific for the Mp P1 gene were designed, and the LAMP method was used to rapidly detect Mp. The sensitivity of the LAMP method was determined by serial dilution of the standard Mp strain FH (standard strains of Mycoplasma pneumoniae). Specificity was assessed with 17 common pathogenic microorganisms in the respiratory tract. Patient samples were collected from the Department of Respiratory and Critical Care Medicine at the 307th Hospital of Chinese People's Liberation Army from March 2016 to May 2017, examined prospectively, and compared with diagnosis by quantitative real-time polymerase chain reaction (qRT-PCR).The LAMP assay for Mp detection can be completed within 60 minutes. The minimum detection limit was 39 pg/μL, and no cross-reaction was observed with 17 common respiratory tract pathogens. Of the 125 clinical specimens tested, 43 cases were positive by LAMP assay, and 40 cases were positive by qRT-PCR (P = .162). All 43 samples determined as positive by LAMP test were confirmed to be Mp by Mp P1 protein sequencing.The LAMP assay is suitable for rapid detection of Mp. It has high sensitivity and specificity, and the detection results are not inferior to those of qRT-PCR.
Insights
A new loop-mediated isothermal amplification (LAMP) assay rapidly detects Mycoplasma pneumoniae (Mp) infection. This sensitive and specific method offers a viable alternative to quantitative real-time polymerase chain reaction (qRT-PCR) for timely diagnosis.
Area of Science:
- Microbiology
- Molecular Diagnostics
- Infectious Diseases
Background:
- Mycoplasma pneumoniae (Mp) infections require accurate and rapid diagnostic methods.
- Antibiotic misuse is a concern in Mp treatment, highlighting the need for precise diagnostics.
Purpose of the Study:
- To develop a loop-mediated isothermal amplification (LAMP) assay for the rapid detection of Mycoplasma pneumoniae.
- To evaluate the sensitivity, specificity, and clinical applicability of the developed LAMP assay.
Main Methods:
- Designed six primers targeting the Mp P1 gene for LAMP assay development.
- Determined assay sensitivity using serial dilutions of a standard Mp strain.
- Assessed specificity against 17 common respiratory pathogens.
- Compared LAMP results with quantitative real-time polymerase chain reaction (qRT-PCR) using 125 clinical samples.
Main Results:
- The LAMP assay detected Mp within 60 minutes with a minimum detection limit of 39 pg/μL.
- No cross-reactivity was observed with 17 common respiratory pathogens, indicating high specificity.
- LAMP assay identified 43 positive cases out of 125 clinical specimens, closely aligning with qRT-PCR results (40 positive cases).
- Sequencing confirmed Mp in all 43 samples positive by LAMP.
Conclusions:
- The developed LAMP assay is suitable for the rapid, sensitive, and specific detection of Mycoplasma pneumoniae.
- This LAMP assay demonstrates comparable performance to qRT-PCR, offering a valuable diagnostic tool.
- The assay can aid in improving Mp diagnosis and reducing unnecessary antibiotic use.
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