Rapid detection of Mycoplasma pneumoniae by loop-mediated isothermal amplification assay

Xin Yuan1, Changqing Bai, Qian Cui

  • 1Department of Respiratory and Critical Care Medicine, 307th Hospital of Chinese People's Liberation Army Institute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing City, China.

Medicine
|June 21, 2018
PubMed

Insights

A new loop-mediated isothermal amplification (LAMP) assay rapidly detects Mycoplasma pneumoniae (Mp) infection. This sensitive and specific method offers a viable alternative to quantitative real-time polymerase chain reaction (qRT-PCR) for timely diagnosis.

Area of Science:

  • Microbiology
  • Molecular Diagnostics
  • Infectious Diseases

Background:

  • Mycoplasma pneumoniae (Mp) infections require accurate and rapid diagnostic methods.
  • Antibiotic misuse is a concern in Mp treatment, highlighting the need for precise diagnostics.

Purpose of the Study:

  • To develop a loop-mediated isothermal amplification (LAMP) assay for the rapid detection of Mycoplasma pneumoniae.
  • To evaluate the sensitivity, specificity, and clinical applicability of the developed LAMP assay.

Main Methods:

  • Designed six primers targeting the Mp P1 gene for LAMP assay development.
  • Determined assay sensitivity using serial dilutions of a standard Mp strain.
  • Assessed specificity against 17 common respiratory pathogens.
  • Compared LAMP results with quantitative real-time polymerase chain reaction (qRT-PCR) using 125 clinical samples.

Main Results:

  • The LAMP assay detected Mp within 60 minutes with a minimum detection limit of 39 pg/μL.
  • No cross-reactivity was observed with 17 common respiratory pathogens, indicating high specificity.
  • LAMP assay identified 43 positive cases out of 125 clinical specimens, closely aligning with qRT-PCR results (40 positive cases).
  • Sequencing confirmed Mp in all 43 samples positive by LAMP.

Conclusions:

  • The developed LAMP assay is suitable for the rapid, sensitive, and specific detection of Mycoplasma pneumoniae.
  • This LAMP assay demonstrates comparable performance to qRT-PCR, offering a valuable diagnostic tool.
  • The assay can aid in improving Mp diagnosis and reducing unnecessary antibiotic use.

Related Concept Videos

RACE - Rapid Amplification of cDNA Ends02:35

RACE - Rapid Amplification of cDNA Ends

Rapid Amplification of cDNA Ends, or RACE, is one of the most effective methods to obtain a full-length cDNA from an mRNA sequence between a known internal region to the unknown sequence at the 5’ or 3’ end. The unknown region is cloned in the cDNA by a gene-specific primer that binds the known end, and a hybrid primer that attaches a predefined anchor sequence to the unknown end of the cDNA. The sequence in between is amplified by PCR with an anchor primer and a gene-specific...
7.3K
Isothermal Processes01:21

Isothermal Processes

A thermodynamic process that occurs at constant temperature is called an isothermal process. Heat slowly flows into the system or out of the system to maintain thermal equilibrium. Processes involving phase changes like water evaporation into steam or freezing water into ice at a constant temperature are examples of Isothermal Processes.
An ideal gas can also undergo isothermal expansion or compression.
For example, consider 1 mole of an ideal gas inside an isolated cylinder at initial volume V...
5.0K
Pneumonia I: Introduction01:30

Pneumonia I: Introduction

Pneumonia is an acute respiratory infection that targets the lungs, specifically the alveoli. These tiny air sacs, essential for oxygen exchange, become engorged with pus and fluid, severely hindering breathing, decreasing oxygen absorption, and causing significant pain and discomfort during respiration.
Risk Factors
Various factors influence the likelihood of developing pneumonia. Age plays a crucial role, with infants, children under two, and individuals over 65 at increased risk due to their...
911
Pneumonia II: Pathophysiology01:29

Pneumonia II: Pathophysiology

The pathophysiology of pneumonia involves the following steps:
3.0K
Receptor-mediated Endocytosis01:39

Receptor-mediated Endocytosis

Overview
111.1K
Feedback Loops01:01

Feedback Loops

In most cases, excessive hormone production is prevented by negative feedback—a loop that starts with a stimulus inducing the release of a particular substance, like a hormone, to maintain a certain level before triggering a signal that results in a decrease in further release of the hormone.
64.5K