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The current limits in virtual screening and property prediction.

Michael C Hutter1

  • 1Center for Bioinformatics, Saarland University, Campus E2.1, 66123 Saarbruecken, Germany.

Future Medicinal Chemistry
|June 29, 2018
PubMed
Summary
This summary is machine-generated.

Virtual screening aids preclinical drug development by predicting molecular properties and reducing experimental work. This computational approach helps optimize drug candidates, addressing metabolic and toxicological challenges early on.

Keywords:
antitargetsdescriptorsdockingmachine learningmetabolizationmolecular dynamicspharmacophoresrational drug designtoxicity

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Area of Science:

  • Computational chemistry
  • Pharmacology
  • Drug discovery

Background:

  • Optimizing drug candidates involves addressing metabolic, toxicological, and off-target effects beyond target binding affinity.
  • Experimental synthesis and testing of drug candidates are resource-intensive.
  • Virtual screening is a crucial computational tool in preclinical drug development.

Purpose of the Study:

  • To highlight the indispensable role of virtual screening in preclinical drug development.
  • To discuss the applications of virtual screening in predicting molecular properties and identifying potential issues.
  • To outline challenges and limitations associated with current computational models in virtual screening.

Main Methods:

  • Application of virtual screening for predicting molecular properties like solubility and metabolic liability.
  • Utilizing virtual screening to predict binding to antitargets, such as the hERG channel.
  • Exploring emerging aspects of virtual screening, including prediction of binding sites and drugable targets.

Main Results:

  • Virtual screening effectively predicts crucial molecular properties relevant to drug development.
  • The approach aids in identifying potential liabilities, including metabolic issues and off-target interactions (e.g., hERG channel binding).
  • Emerging applications show promise in predicting drug targets and binding sites.

Conclusions:

  • Virtual screening significantly reduces the experimental burden in preclinical drug development.
  • Computational models, including machine learning, face challenges in prediction accuracy and overfitting.
  • Continued development of virtual screening methods is essential for efficient drug discovery and optimization.