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A beginner's guide to rigor and reproducibility in fluorescence imaging experiments.

Jen-Yi Lee1, Maiko Kitaoka2

  • 1Molecular Imaging Center, Cancer Research Laboratory, University of California, Berkeley, Berkeley, CA 94720.

Molecular Biology of the Cell
|June 29, 2018
PubMed
Summary

This perspective offers a guide to best practices in fluorescence light microscopy for reliable cell biology research. It emphasizes critical assessment of experimental design, execution, and data management for rigor and reproducibility.

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Area of Science:

  • Cell Biology
  • Microscopy
  • Biotechnology

Background:

  • Fluorescence light microscopy is crucial for studying cellular mechanisms.
  • Advanced tools like fluorescent proteins and superresolution enhance microscopy's power.
  • Ensuring reliability and reproducibility in imaging experiments is essential.

Purpose of the Study:

  • To provide a guide on best practices for designing and executing fluorescence imaging experiments.
  • To introduce researchers to concepts for acquiring rigorous imaging data.
  • To promote critical assessment of bias, rigor, and reproducibility in all experimental steps.

Main Methods:

  • Review of experimental design considerations in fluorescence microscopy.
  • Guidelines for execution of imaging experiments.

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  • Recommendations for data analysis, reporting, and management.
  • Main Results:

    • A framework for best practices in fluorescence light microscopy is presented.
    • Emphasis on critical evaluation of each experimental step for rigor.
    • Empowering researchers to achieve reproducible imaging data.

    Conclusions:

    • Adherence to best practices is vital for reliable fluorescence microscopy.
    • Critical assessment across all stages ensures data integrity.
    • This guide aims to enhance the rigor of cell biology imaging studies.