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Published on: August 26, 2016
MTMR4, a phosphoinositide-specific 3'-phosphatase, regulates TFEB activity and the endocytic and autophagic pathways
Hoa Q Pham1, Kazuaki Yoshioka1, Hiromi Mohri1
1Department of Physiology, Kanazawa University School of Medicine, Kanazawa, Japan.
Abstract:
Phosphatidylinositol 3-phosphate (PI(3)P) is the predominant phosphoinositide species in early endosomes and autophagosomes, in which PI(3)P dictates traffic of these organelles. Phosphoinositide levels are tightly regulated by lipid-kinases and -phosphatases; however, a phosphatase that converts PI(3)P back to phosphatidylinositol in the endosomal and autophagosomal compartments is not fully understood. We investigated the subcellular distribution and functions of myotubularin-related protein-4 (MTMR4), which is distinct among other MTMRs in that it possesses a PI(3)P-binding FYVE domain, in lung alveolar epithelium-derived A549 cells. MTMR4 was localized mainly in late endosomes and autophagosomes. MTMR4 knockdown markedly suppressed the motility, fusion, and fission of PI(3)P-enriched structures, resulting in decreases in late endosomes, autophagosomes, and lysosomes, and enlargement of PI(3)P-enriched early and late endosomes. In amino acid- and serum-starved cells, MTMR4 knockdown decreased both autophagosomes and autolysosomes and markedly increased PI(3)P-containing autophagosomes and late endosomes, suggesting that the fusion with lysosomes of autophagosomes and late endosomes might be impaired. Notably, MTMR4 knockdown inhibited the nuclear translocation of starvation stress responsive transcription factor-EB (TFEB) with reduced expression of lysosome-related genes in starved cells. These findings indicate that MTMR4 is essential for the integrity of endocytic and autophagic pathways.
Insights
Myotubularin-related protein-4 (MTMR4) is crucial for regulating endosomes and autophagosomes. Its absence impairs organelle traffic, fusion, and lysosomal pathways, impacting cellular stress responses.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- Phosphatidylinositol 3-phosphate (PI(3)P) regulates endosomal and autophagosomal traffic.
- The specific phosphatase converting PI(3)P back to phosphatidylinositol in these compartments remains unclear.
- Myotubularin-related proteins (MTMRs) are involved in phosphoinositide metabolism.
Purpose of the Study:
- To investigate the subcellular localization and function of myotubularin-related protein-4 (MTMR4).
- To elucidate MTMR4's role in the endocytic and autophagic pathways.
- To understand MTMR4's impact on cellular response to starvation.
Main Methods:
- Subcellular localization studies of MTMR4 in A549 cells.
- MTMR4 knockdown experiments using RNA interference.
- Analysis of endosome and autophagosome dynamics, including motility, fusion, and fission.
- Assessment of lysosomal pathways and transcription factor EB (TFEB) nuclear translocation.
Main Results:
- MTMR4 localizes to late endosomes and autophagosomes.
- MTMR4 knockdown disrupts PI(3)P-enriched organelle dynamics, leading to enlarged endosomes and reduced autophagosomes/lysosomes.
- Starvation-induced autophagy and lysosomal gene expression are impaired upon MTMR4 knockdown.
- Nuclear translocation of TFEB is inhibited in MTMR4-deficient starved cells.
Conclusions:
- MTMR4 is essential for maintaining the integrity of endocytic and autophagic pathways.
- MTMR4 plays a critical role in organelle trafficking and fusion within the endolysosomal system.
- MTMR4 is involved in the cellular response to nutrient starvation via TFEB regulation.
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