The rabbit as an orthologous small animal model for APOBEC3A oncogenesis

Hélène C Laude1, Vincent Caval1, Mohamed S Bouzidi1

  • 1Molecular Retrovirology Unit, Institut Pasteur, CNRS UMR 3569, France.

Oncotarget
|July 3, 2018
PubMed

Insights

Researchers identified a rabbit APOBEC3A enzyme, crucial in cancer development, which is conserved with humans. This finding suggests rabbits are a valuable model for studying APOBEC3-driven oncogenesis.

Area of Science:

  • Molecular Biology
  • Genetics
  • Oncology

Background:

  • APOBEC3 enzymes are cytidine deaminases involved in human oncogenesis.
  • The APOBEC3 locus varies across mammals, with APOBEC3A and APOBEC3B having distinct conservation patterns.
  • Understanding APOBEC3 function requires suitable animal models.

Purpose of the Study:

  • To characterize the rabbit APOBEC3 locus and its encoded enzymes.
  • To investigate the functional conservation and regulatory mechanisms of rabbit APOBEC3A.
  • To evaluate the potential of rabbits as a model for APOBEC3-driven oncogenesis.

Main Methods:

  • Bioinformatic analysis of the rabbit APOBEC3 locus.
  • Biochemical assays to determine the enzymatic activity of rabbit APOBEC3A.
  • Expression analysis in rabbit tissues.
  • Interaction studies with rabbit TRIB3.

Main Results:

  • The rabbit APOBEC3 locus encodes two genes, including an APOBEC3A ortholog of human APOBEC3A.
  • Rabbit APOBEC3A deaminates DNA, induces double-strand breaks, and is regulated by TRIB3, similar to its human counterpart.
  • Unlike human APOBEC3A, rabbit APOBEC3A is widely expressed across rabbit tissues.

Conclusions:

  • The APOBEC3A/TRIB3 regulatory pair is conserved over 100 million years.
  • Rabbit APOBEC3A exhibits functional similarities and differences compared to human APOBEC3A.
  • The broad expression of rabbit APOBEC3A supports its utility as a small animal model for studying APOBEC3-driven oncogenesis.

Related Concept Videos

Tonicity in Animals00:59

Tonicity in Animals

The tonicity of a solution determines if a cell gains or loses water in that solution. The tonicity depends on the permeability of the cell membrane for different solutes and the concentration of nonpenetrating solutes in the solution within and outside of the cell. If a semipermeable membrane hinders the passage of some solutes but allows water to follow its concentration gradient, water moves from the side with low osmolarity (i.e., less solute) to the side with higher osmolarity (i.e.,...
125.1K
Tonicity in Animals01:16

Tonicity in Animals

Tonicity describes the amount of solute in a solution. The measure of the tonicity of a solution, or the total amount of solutes dissolved in a specific amount of solution, is called its osmolarity. Three terms—hypotonic, isotonic, and hypertonic—are used to relate the osmolarity of a cell to the osmolarity of the extracellular fluid that contains the cells. In a hypotonic solution, such as tap water, the extracellular fluid has a lower concentration of solutes than the fluid inside...
5.3K
Animal Mitochondrial Genetics02:59

Animal Mitochondrial Genetics

Among all the organelles in an animal cell, only mitochondria have their own independent genomes. Animal mitochondrial DNA is a double-stranded, closed-circular molecule with around 20,000 base pairs. Mitochondrial DNA is unique in that one of its two strands, the heavy, or H, -strand is guanine rich, whereas the complementary strand is cytosine rich and called the light, or L, -strand. Compared to nuclear DNA, mitochondrial DNA has a very low percentage of non-coding regions and is marked by...
9.3K
Animal and Plant Cell Structure01:30

Animal and Plant Cell Structure

Animal and plant cells not only differ in their structure, function, and mode of nutrition but also in how they reproduce, specialize, and organize into complex structures.
Cell Division
Though both plant and animal cells divide by mitosis (for non-gametic cells) and meiosis (for gametic cells), they differ in the specifics of this process. Unlike animal cells, plant cells lack centrosomes — an organelle responsible for organizing the spindle fibers and segregating the chromosomes during...
48.6K
Molecular Models02:00

Molecular Models

Physical models representing molecular architectures of chemical compounds play essential roles in understanding chemistry. The use of molecular models makes it easier to visualize the structures and shapes of atoms and molecules.
43.8K
The Bohr Model02:18

The Bohr Model

Following the work of Ernest Rutherford and his colleagues in the early twentieth century, the picture of atoms consisting of tiny dense nuclei surrounded by lighter and even tinier electrons continually moving about the nucleus was well established. This picture was called the planetary model since it pictured the atom as a miniature “solar system” with the electrons orbiting the nucleus like planets orbiting the sun. The simplest atom is hydrogen, consisting of a single proton as the...
81.0K