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Published on: July 22, 2012
Multiplex PCR reveals a high prevalence of multiple pathogens in traveller's diarrhoea in children
Marie Pouletty1, Loïc De Pontual2,3,4,5,6, Moreen Lopez3
1General Pediatric Department, Robert Debré Hospital, Paris, France.
Insights
Multiplex PCR detected numerous pathogens in children with traveller's diarrhoea, significantly improving detection rates for bacteria compared to traditional methods. This advance enables earlier and more accurate antibiotic treatment for paediatric TD.
Area of Science:
- Medical Microbiology
- Paediatric Infectious Diseases
- Molecular Diagnostics
Background:
- Traveller's diarrhoea (TD) is a common illness in children returning from tropical regions.
- Accurate identification of causative pathogens is crucial for effective treatment.
Purpose of the Study:
- To evaluate the distribution of pathogens causing TD in children.
- To assess the utility of multiplex PCR for diagnosing TD in paediatric patients.
Main Methods:
- A prospective study included 59 children with TD admitted to two university hospitals.
- Stool samples were analyzed using a multiplex PCR FilmArray GI panel detecting 22 pathogens.
- Multiplex PCR results were compared with conventional culture methods for key enteropathogenic bacteria.
Main Results:
- At least one pathogen was identified in 98% of cases, with diverse bacteria, viruses, and parasites detected.
- Multiplex PCR identified 25% more enteropathogenic bacteria than conventional culture.
- Common pathogens included E. coli strains, Salmonella, Shigella, Campylobacter, Cryptosporidium, and norovirus. Coinfections were frequent (52 cases).
Conclusions:
- Multiplex PCR reveals a high prevalence of enteric pathogens and coinfections in children with TD.
- This molecular technique offers superior detection of major enteropathogenic bacteria compared to culture methods.
- Multiplex PCR facilitates earlier, appropriate antibiotic treatment, optimizing patient management.
Objective:
Traveller's diarrhoea (TD) is one of the most frequent illnesses affecting children returning from tropical countries. The purpose of this study was to assess the distribution of pathogens associated with TD in children using a multiplex PCR assay on stool samples.
Design:
All the children admitted for TD in two university hospitals from 1 August to 15October during 2014 and 2015 were included in a prospective study. Stool samples were tested by a multiplex PCR FilmArray GI panel detecting 22 pathogens. Performances for the detection of major enteropathogenic bacteria (Salmonella, Shigella and Campylobacter spp) by multiplex PCR and conventional culture methods were compared. The prevalence of extended spectrum beta-lactamase (ESBL)-producing Enterobacteriaceae was also determined.
Results:
Fifty-nine children were included. In 58 cases (98%), at least one pathogen was identified, including 9 different enteropathogenic bacteria, 5 viruses and 2 parasites. Multiplex PCR enhanced the enteropathogenic bacteria detection by 25%. The most frequent pathogens were enteroaggregative Escherichia coli (n=32), enteropathogenic E. coli (n=26), enterotoxigenic E. coli (n=19), Salmonella enterica, enteroinvasive E. coli/Shigella (n=16 each), Cryptosporidium, sapovirus (n=11 each), Campylobacter jejuni, norovirus (n=10 each), rotavirus (n=9), Giardia (n=8) and Shiga-toxin-producing E. coli (n=4). Fifty-two coinfections were observed, notably including bacteria and viruses (n=21), multiple bacteria (n=14), or bacteria and parasites (n=10). ESBL were detected in 28 cases. Multiplex PCR could optimise the number of treated patients by 27% compared with stool cultures.
Conclusion:
Multiplex PCR on stools revealed a high prevalence of diverse enteric pathogens and coinfections in children with TD. Major enteropathogenic bacteria were more frequently detected by multiplex PCR compared with conventional culture. Finally, this technique allows the start of appropriate and early antibiotic treatment and seems to optimise the number of correctly treated patients.
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