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Delivery of Therapeutic siRNA to the CNS Using Cationic and Anionic Liposomes
Published on: July 23, 2016
Cationic liposomes induce cytotoxicity in HepG2 via regulation of lipid metabolism based on whole-transcriptome
Ying Li1, Xiu-Liang Cui2,3, Qing-Shan Chen1
1Department of Pharmacy, Eastern Hepatobiliary Surgery Hospital, Second Military Medical University, Shanghai, 200438, China.
Backgroud:
Cationic liposomes (CLs) can be used as non-viral vectors in gene transfer and drug delivery. However, the underlying molecular mechanism of its cytotoxicity has not been well elucidated yet.
Methods:
We herein report a systems biology approach based on whole-transcriptome sequencing coupled with computational method to identify the predominant genes and pathways involved in the cytotoxicity of CLs in HepG2 cell line.
Results:
Firstly, we validated the concentration-dependent cytotoxicity of CLs with an IC50 of 120 μg/ml in HepG2 exposed for 24 h. Subsequently, we used whole-transcriptome sequencing to identify 220 (77 up- and 143 down-regulated) differentially expressed genes (DEGs). Gene ontology (GO) and pathway analysis showed that these DEGs were mainly related to cholesterol, steroid, lipid biosynthetic and metabolic processes. Additionally, "key regulatory" genes were identified using gene act, pathway act and co-expression network analysis, and expression levels of 11 interested altered genes were confirmed by quantitative real time PCR. Interestingly, no cell cycle arrest was observed through flow cytometry.
Conclusions:
These data are expected to provide deep insights into the molecular mechanism of CLs cytotoxicity.
Insights
Cationic liposomes (CLs) exhibit concentration-dependent cytotoxicity in HepG2 cells. Transcriptome sequencing revealed altered lipid metabolism pathways, offering insights into CLs
Area of Science:
- Molecular Biology
- Systems Biology
- Toxicology
Background:
- Cationic liposomes (CLs) are utilized as non-viral vectors for gene transfer and drug delivery.
- The precise molecular mechanisms underlying CL-induced cytotoxicity remain incompletely understood.
Purpose of the Study:
- To elucidate the molecular mechanisms of cationic liposome (CL) cytotoxicity using a systems biology approach.
- To identify key genes and pathways affected by CL exposure in HepG2 cells.
Main Methods:
- Whole-transcriptome sequencing was employed to analyze gene expression changes in HepG2 cells treated with CLs.
- Computational methods, including gene ontology and pathway analysis, were used to identify affected biological processes.
- Quantitative real-time PCR (qRT-PCR) was performed to validate the expression levels of selected genes.
Main Results:
- Cationic liposomes demonstrated a concentration-dependent cytotoxicity with an IC50 of 120 μg/ml in HepG2 cells after 24 hours.
- Whole-transcriptome sequencing identified 220 differentially expressed genes (DEGs), predominantly involved in cholesterol, steroid, and lipid biosynthesis and metabolism.
- No significant cell cycle arrest was observed via flow cytometry analysis.
Conclusions:
- The study provides a comprehensive understanding of the molecular mechanisms underlying CL cytotoxicity.
- The findings highlight the significant impact of CLs on lipid metabolism pathways in HepG2 cells.
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