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Updated: Feb 7, 2026

Testing Targeted Therapies in Cancer using Structural DNA Alteration Analysis and Patient-Derived Xenografts
Published on: July 25, 2020
New Insights Into DNA Helicases as Druggable Targets for Cancer Therapy
Arindam Datta1, Robert M Brosh1
1Laboratory of Molecular Gerontology, National Institute on Aging, National Institutes of Health, NIH Biomedical Research Center, Baltimore, MD, United States.
Abstract:
Small molecules that deter the functions of DNA damage response machinery are postulated to be useful for enhancing the DNA damaging effects of chemotherapy or ionizing radiation treatments to combat cancer by impairing the proliferative capacity of rapidly dividing cells that accumulate replicative lesions. Chemically induced or genetic synthetic lethality is a promising area in personalized medicine, but it remains to be optimized. A new target in cancer therapy is DNA unwinding enzymes known as helicases. Helicases play critical roles in all aspects of nucleic acid metabolism. We and others have investigated small molecule targeted inhibition of helicase function by compound screens using biochemical and cell-based approaches. Small molecule-induced trapping of DNA helicases may represent a generalized mechanism exemplified by certain topoisomerase and PARP inhibitors that exert poisonous consequences, especially in rapidly dividing cancer cells. Taking the lead from the broader field of DNA repair inhibitors and new information gleaned from structural and biochemical studies of DNA helicases, we predict that an emerging strategy to identify useful helicase-interacting compounds will be structure-based molecular docking interfaced with a computational approach. Potency, specificity, drug resistance, and bioavailability of helicase inhibitor drugs and targeting such compounds to subcellular compartments where the respective helicases operate must be addressed. Beyond cancer therapy, continued and new developments in this area may lead to the discovery of helicase-interacting compounds that chemically rescue clinically relevant helicase missense mutant proteins or activate the catalytic function of wild-type DNA helicases, which may have novel therapeutic application.
Insights
Small molecules inhibiting DNA helicases can enhance cancer chemotherapy by trapping these enzymes. This approach targets rapidly dividing cancer cells, offering a new avenue for personalized medicine.
Area of Science:
- Molecular Biology
- Biochemistry
- Pharmacology
Background:
- DNA damage response (DDR) inhibitors can enhance chemotherapy and radiation efficacy.
- DNA helicases are crucial for nucleic acid metabolism and are emerging cancer targets.
- Targeting helicase function with small molecules offers a promising strategy for cancer therapy.
Purpose of the Study:
- To explore the potential of small molecules that inhibit DNA helicase function for cancer treatment.
- To investigate helicase inhibition as a mechanism to enhance DNA-damaging therapies.
- To identify novel therapeutic strategies based on helicase-interacting compounds.
Main Methods:
- Compound screening using biochemical and cell-based assays.
- Investigating small molecule-induced trapping of DNA helicases.
- Utilizing structure-based molecular docking and computational approaches for compound identification.
Main Results:
- Small molecule-induced trapping of DNA helicases shows promise, similar to topoisomerase and PARP inhibitors.
- This mechanism can impair the proliferative capacity of rapidly dividing cancer cells.
- Potential for developing potent and specific helicase inhibitors.
Conclusions:
- Inhibiting DNA helicases is a viable strategy to enhance cancer therapy.
- Structure-based drug design and computational methods are key for identifying effective helicase inhibitors.
- Future applications may include rescuing mutant helicases or activating wild-type enzymes for novel therapeutics.
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