Evaluation of methods for volumetric analysis of pediatric brain data: The childmetrix pipeline versus adult-based approaches
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Thanh Vân Phan1, Diana M Sima2, Caroline Beelen3
1icometrix, Research and Development, Leuven, Belgium; Experimental Oto-rhino-laryngology, Department Neurosciences, KU Leuven, Leuven, Belgium.
Insights
Childmetrix offers improved pediatric brain MRI analysis by using an age-specific atlas for more accurate gray and white matter segmentation. This tool enhances reproducibility and motion robustness, outperforming adult-based methods for developmental disorder research.
Area of Science:
- Neuroimaging
- Pediatric Neuroscience
- Medical Image Analysis
Background:
- Pediatric brain volumetric analysis using MRI is crucial for understanding development and neurodevelopmental disorders.
- Existing methods face bias from head motion and anatomical disparities in pediatric brains, as adult-based atlases are inadequate.
- Accurate segmentation of gray matter (GM) and white matter (WM) is essential for reliable volumetric analysis.
Purpose of the Study:
- To introduce childmetrix, a novel tool for pediatric neuroimaging data analysis.
- To overcome limitations of adult-based methods in pediatric brain MRI analysis, particularly concerning motion artifacts and anatomical differences.
- To improve the accuracy, reproducibility, and robustness of gray matter and white matter segmentation in children's brains.
Main Methods:
- Development of childmetrix, utilizing an age-specific atlas and a probabilistic model-based approach for GM and WM segmentation.
- Validation on 55 pediatric scans (ages 5-8, including developmental dyslexia) and 10 test-retest pairs.
- Comparison with state-of-the-art adult-atlas-based methods: icobrain (probabilistic) and Freesurfer (surface-based).
Main Results:
- Childmetrix demonstrated superior reproducibility in GM and WM segmentations compared to Freesurfer.
- Childmetrix showed better robustness to head motion in GM volume estimation than Freesurfer.
- Childmetrix achieved 82-84% overlap with manual segmentation, outperforming adult-based methods, especially on low-quality data.
- Adult-based methods required twice as many subjects to detect morphological differences between dyslexic and typical readers.
Conclusions:
- Childmetrix provides more accurate and reliable pediatric brain volumetric measures than current adult-based methods.
- The tool's age-specific approach enhances robustness to motion and anatomical variations in pediatric neuroimaging.
- Childmetrix has the potential to significantly aid in the examination and understanding of children's brain development and disorders.
Abstract:
Pediatric brain volumetric analysis based on Magnetic Resonance Imaging (MRI) is of particular interest in order to understand the typical brain development and to characterize neurodevelopmental disorders at an early age. However, it has been shown that the results can be biased due to head motion, inherent to pediatric data, and due to the use of methods based on adult brain data that are not able to accurately model the anatomical disparity of pediatric brains. To overcome these issues, we proposed childmetrix, a tool developed for the analysis of pediatric neuroimaging data that uses an age-specific atlas and a probabilistic model-based approach in order to segment the gray matter (GM) and white matter (WM). The tool was extensively validated on 55 scans of children between 5 and 6 years old (including 13 children with developmental dyslexia) and 10 pairs of test-retest scans of children between 6 and 8 years old and compared with two state-of-the-art methods using an adult atlas, namely icobrain (applying a probabilistic model-based segmentation) and Freesurfer (applying a surface model-based segmentation). The results obtained with childmetrix showed a better reproducibility of GM and WM segmentations and a better robustness to head motion in the estimation of GM volume compared to Freesurfer. Evaluated on two subjects, childmetrix showed good accuracy with 82-84% overlap with manual segmentation for both GM and WM, thereby outperforming the adult-based methods (icobrain and Freesurfer), especially for the subject with poor quality data. We also demonstrated that the adult-based methods needed double the number of subjects to detect significant morphological differences between dyslexics and typical readers. Once further developed and validated, we believe that childmetrix would provide appropriate and reliable measures for the examination of children's brain.
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