Presence of Segmented Filamentous Bacteria in Human Children and Its Potential Role in the Modulation of Human Gut

Bo Chen1,2, Huahai Chen3, Xiaoli Shu2

  • 1State Key Laboratory for Diagnosis and Treatment of Infectious Diseases-Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.

Insights

Segmented filamentous bacteria (SFB) are rare in human gut microbiota but influence immune system development. Their presence correlates with secretory IgA (sIgA) and Th17 pathway gene expression in children.

Area of Science:

  • Microbiology
  • Immunology
  • Gastroenterology

Background:

  • Segmented filamentous bacteria (SFB) are known commensals that interact with the host immune system.
  • SFB colonization in mice promotes immune maturation, but their role in human gut immunity is less understood.
  • Previous studies indicated SFB colonization in humans primarily occurs by 36 months of age and is difficult to detect later.

Purpose of the Study:

  • To quantify SFB levels in human intestinal fluids.
  • To investigate the correlation between SFB presence and host immune markers, specifically secretory IgA (sIgA) and Th17 pathway gene expression.
  • To elucidate the role of SFB in the development of human gut immunity.

Main Methods:

  • Quantitative PCR (qPCR) to measure SFB levels in intestinal fluids.
  • Fluorescent in situ hybridization (FISH) and scanning electron microscopy (SEM) to visualize SFB morphology.
  • Multiple displacement amplification PCR and mass spectrometry for SFB DNA and peptide identification.
  • Analysis of secretory IgA (sIgA) titers and RT-qPCR for Th17 pathway gene expression in ileal biopsies.

Main Results:

  • SFB constitute a small fraction of the total microbiota in SFB-positive individuals.
  • A positive correlation was observed between SFB presence and total sIgA levels, particularly in children aged 8-36 months.
  • SFB presence was associated with increased expression of Th17 pathway genes and upregulation of T and B cell receptor signaling pathways in ileal biopsies.

Conclusions:

  • Segmented filamentous bacteria are rare members of the human gut microbiota.
  • SFB presence is linked to elevated sIgA and Th17 immune responses in children.
  • These findings suggest SFB play a significant role in the development of the human gut immune system.

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