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Updated: Feb 7, 2026

Watershed Planning within a Quantitative Scenario Analysis Framework
Published on: July 24, 2016
Spatially explicit pollutant load-integrated in-stream E. coli concentration modeling in a mixed land-use catchment
Madusanka Thilakarathne1, Venkataramana Sridhar1, Raghupathy Karthikeyan2
1Biological Systems Engineering, Virginia Polytechnic Institute and State University, 212 Seitz Hall, Blacksburg, VA 24061, USA.
This study modeled Escherichia coli (E. coli) contamination in Upper Stroubles Creek using the Soil and Water Assessment Tool (SWAT). Results highlight the importance of detailed bacteria load data and sediment processes for accurate environmental modeling of fecal bacteria.
Area of Science:
- Environmental Science
- Water Quality Modeling
- Microbial Ecology
Background:
- Pathogen contamination, particularly fecal bacteria like Escherichia coli (E. coli), is a primary driver of surface water impairment in the U.S.
- Environmental models are crucial for assessing watershed management strategies and understanding microbial loading.
- The Upper Stroubles Creek in Virginia is designated as an impaired water body due to recent bacterial contamination.
Purpose of the Study:
- To assess E. coli contamination in the Upper Stroubles Creek, Virginia, using the Soil and Water Assessment Tool (SWAT).
- To evaluate the effectiveness of the Spatially Explicit Load Enrichment Calculation Tool (SELECT) for E. coli load estimations within the SWAT model.
- To investigate the role of sediment-bacteria interactions (resuspension-deposition) in E. coli transport and concentration.
Main Methods:
- Utilized the Soil and Water Assessment Tool (SWAT) for watershed modeling.
- Employed the Spatially Explicit Load Enrichment Calculation Tool (SELECT) for high-resolution E. coli load estimations at the Hydrological Response Unit (HRU) level.
- Simulated in-stream E. coli concentrations, incorporating sediment bacteria resuspension-deposition processes, and compared model outputs with measured data.
Main Results:
- Nash-Sutcliffe Efficiency (NSE) values for in-stream E. coli simulations ranged from -0.41 to 0.34 without sediment resuspension-deposition and -0.19 to 0.36 with it.
- The SWAT model demonstrated a tendency to overestimate E. coli concentrations at mid-range flows and underestimate at low flows.
- High-resolution E. coli loads and sediment processes indicated greater contamination in forested areas compared to urban and pasture lands.
Conclusions:
- Detailed E. coli load estimations and the inclusion of sediment bacteria resuspension-deposition are critical for accurate environmental modeling.
- Land use information significantly influences the distribution of E. coli in aquatic environments.
- Improved bacterial source characterization and modeling approaches are necessary for effective watershed management of impaired waters.
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